RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 OR13G1Q8NGZ3 307 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 SPTA1P02549 2419 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 PIKFYVEQ9Y2I7 2098 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 SPINT1O43278 529 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 CD8AP01732 235 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 LSM6P62312 80 aaKnown RBP17.01■□□□□ 0.31
SUDS3-204ENST00000543473 ETFRF1Q6IPR1 90 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 COMMD5Q9GZQ3 224 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 KCNE5Q9UJ90 142 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 P2RY4P51582 365 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 MYPOPQ86VE0 399 aaPredicted RBP17.01■□□□□ 0.31
SUDS3-204ENST00000543473 SOSTQ9BQB4 213 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 HDHD3Q9BSH5 251 aaPredicted RBP17.01■□□□□ 0.31
SUDS3-204ENST00000543473 DYNLRB1Q9NP97 96 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 MANBALQ9NQG1 85 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 TMEM30CPA0ZSE6 113 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 TNFSF15O95150 251 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 EPHA8P29322 1005 aaPredicted RBP17.01■□□□□ 0.31
SUDS3-204ENST00000543473 SLC36A1Q7Z2H8 476 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 LPAR5Q9H1C0 372 aa17.01■□□□□ 0.31
SUDS3-204ENST00000543473 ADRA2AP08913 450 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 C1orf100Q5SVJ3 147 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 OR10C1Q96KK4 312 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 BET1LQ9NYM9 111 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 TMEM265A0A087WTH1 108 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 RRP8O43159 456 aaKnown RBP17■□□□□ 0.31
SUDS3-204ENST00000543473 NGFP01138 241 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 CT45A10P0DMU9 189 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 FZD5Q13467 585 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 DPPA3Q6W0C5 159 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 Q6ZN92 141 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 H1FXQ92522 213 aaKnown RBP17■□□□□ 0.31
SUDS3-204ENST00000543473 A0A1W2PP11 408 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 DNASE2O00115 360 aaPredicted RBP17■□□□□ 0.31
SUDS3-204ENST00000543473 NGFRP08138 427 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 OR10J1P30954 320 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 BTCP35070 178 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 ROM1Q03395 351 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 SMOC1Q9H4F8 434 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 CCL28Q9NRJ3 127 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 DOK5Q9P104 306 aa17■□□□□ 0.31
SUDS3-204ENST00000543473 C11orf94C9JXX5 98 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 HKR1P10072 659 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 ERHP84090 104 aaKnown RBP16.99■□□□□ 0.31
SUDS3-204ENST00000543473 NR2C2APQ86WQ0 139 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 C10orf35Q96D05 121 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 RHOVQ96L33 236 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 FAM173AQ9BQD7 235 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 TAAR3PQ9P1P4 343 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 DMRT1Q9Y5R6 373 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 NPTNQ9Y639 398 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 LOC285556D6RIA3 1793 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 TRDCB7Z8K6 153 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 NDUFB7P17568 137 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 FCARP24071 287 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 ID4P47928 161 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 TRIB1Q96RU8 372 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 FSCN3Q9NQT6 498 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 BRCA1P38398 1863 aaKnown RBP16.99■□□□□ 0.31
SUDS3-204ENST00000543473 J3QR89 54 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 DDTP30046 118 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 GTF2H5Q6ZYL4 71 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 PLPPR2Q96GM1 343 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 GPR61Q9BZJ8 451 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 HRASP01112 189 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 RUNX1Q01196 453 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 ZNF385CQ66K41 422 aaPredicted RBP16.99■□□□□ 0.31
SUDS3-204ENST00000543473 ETV3LQ6ZN32 361 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 OR10G8Q8NGN5 311 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 AQP3Q92482 292 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 R4GN57 208 aa16.99■□□□□ 0.31
SUDS3-204ENST00000543473 GNG4P50150 75 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 BPIFB3P59826 476 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 ANKRD55Q3KP44 614 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 ARSJQ5FYB0 599 aaPredicted RBP16.98■□□□□ 0.31
SUDS3-204ENST00000543473 PTPMT1Q8WUK0 201 aaPredicted RBP16.98■□□□□ 0.31
SUDS3-204ENST00000543473 ZNF891A8MT65 544 aaPredicted RBP16.98■□□□□ 0.31
SUDS3-204ENST00000543473 RPLP1P05386 114 aaKnown RBP16.98■□□□□ 0.31
SUDS3-204ENST00000543473 CDX1P47902 265 aaPredicted RBP16.98■□□□□ 0.31
SUDS3-204ENST00000543473 RTL8BQ17RB0 113 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 C2orf68Q2NKX9 166 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 RNASEKQ6P5S7 137 aaKnown RBP16.98■□□□□ 0.31
SUDS3-204ENST00000543473 Q8IYB0 196 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 ARID2Q68CP9 1835 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 KLF4O43474 513 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 M1APQ8TC57 530 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 CHST5Q9GZS9 411 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 GYPAP02724 150 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 GALNSP34059 522 aa16.98■□□□□ 0.31
SUDS3-204ENST00000543473 MRPL30Q8TCC3 161 aaKnown RBP16.98■□□□□ 0.31
SUDS3-204ENST00000543473 DBX1A6NMT0 343 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 M0R1X1 148 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 WIPI1Q5MNZ9 446 aaPredicted RBP16.97■□□□□ 0.31
SUDS3-204ENST00000543473 METTL1Q9UBP6 276 aaKnown RBP16.97■□□□□ 0.31
SUDS3-204ENST00000543473 UNC13CQ8NB66 2214 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 LOC102723971A0A1B0GUV8 181 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 C4orf51C9J302 202 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 ZNF253O75346 499 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 KLK2P20151 261 aa16.97■□□□□ 0.31
SUDS3-204ENST00000543473 MDH2P40926 338 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms