RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 BTNL8Q6UX41 500 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 CXorf67Q86X51 503 aaPredicted RBP13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 C15orf54Q8N8G6 183 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 PIGCQ92535 297 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 HIST1H2BAQ96A08 127 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 C10orf35Q96D05 121 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 SNRNP40Q96DI7 357 aaKnown RBP13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 EGLN1Q9GZT9 426 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 BANF2Q9H503 90 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 SH3BGRL2Q9UJC5 107 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 FAM157AC9JC47 383 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 S100A9P06702 114 aaKnown RBP13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 S100A6P06703 90 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 HOXB5P09067 269 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 CPT2P23786 658 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 APOBEC3DQ96AK3 386 aaPredicted RBP13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 KIRREL1Q96J84 757 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 NIT2Q9NQR4 276 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 CACFD1Q9UGQ2 172 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 ZNF391Q9UJN7 358 aa13.11□□□□□ -0.31
CLPTM1-202ENST00000541297 A0A1W2PPE3 182 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 DHRS7CA6NNS2 312 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 MFNGO00587 321 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 MPIG6BO95866 241 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 NRASP01111 189 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 SMIM6P0DI80 62 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 PRF1P14222 555 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 OR8B8Q15620 311 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 PNLDC1Q8NA58 520 aaKnown RBP13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 CCDC54Q8NEL0 328 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 SECTM1Q8WVN6 248 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 SPSB4Q96A44 273 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 C2orf50Q96LR7 162 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 C1orf147Q96MC9 270 aaPredicted RBP13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 RPS10P5Q9NQ39 176 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 UBE2CO00762 179 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 SCGNO76038 276 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 HTR3BO95264 441 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 CGAP01215 116 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 COX5AP20674 150 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 GLRA1P23415 457 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 MTCP1P56278 107 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 VAX1Q5SQQ9 334 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 SPATA46Q5T0L3 261 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 MRPL21Q7Z2W9 205 aaKnown RBP13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 ARRDC1Q8N5I2 433 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 POC1AQ8NBT0 407 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 OR56B2PQ8NGI1 322 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 RAB3CQ96E17 227 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 ZNF251Q9BRH9 671 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 ELL3Q9HB65 397 aaPredicted RBP13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 CRIM1Q9NZV1 1036 aa13.1□□□□□ -0.31
CLPTM1-202ENST00000541297 PCNX1Q96RV3 2341 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 SDCBPO00560 298 aaPredicted RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 CNOT4O95628 575 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 S100A8P05109 93 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 OR8U9P0C7N5 309 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 ZNF14P17017 642 aaPredicted RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 HOXC12P31275 282 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 SULT1A2P50226 295 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 TMEM50BP56557 158 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 MALLQ13021 153 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 EIF5AL1Q6IS14 154 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 DPPA2Q7Z7J5 298 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 OR8U1Q8NH10 309 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 PARP12Q9H0J9 701 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 DNAJB11Q9UBS4 358 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 TINAGQ9UJW2 476 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 ATRXP46100 2492 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 IGKV1-27A0A075B6S5 117 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 CEACAM18A8MTB9 384 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 SFTPBP07988 381 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 CHRM2P08172 466 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 HKR1P10072 659 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 HIST1H1DP16402 221 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 DVL1P1P54792 670 aaPredicted RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 IL15RAQ13261 267 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 PLCXD3Q63HM9 321 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 GFRALQ6UXV0 394 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 Q6ZRG5 221 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 OR13G1Q8NGZ3 307 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 REPIN1Q9BWE0 567 aaKnown RBP13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 SPTA1P02549 2419 aa13.09□□□□□ -0.31
CLPTM1-202ENST00000541297 ZNF850A8MQ14 1090 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 SPRY1O43609 319 aaPredicted RBP13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 SERPINA2P20848 420 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 FPR2P25090 351 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 TBC1D28Q2M2D7 210 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 PEG10Q86TG7 708 aaKnown RBP13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 OR5H2Q8NGV7 314 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 ISOC2Q96AB3 205 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 NUDT16L1Q9BRJ7 211 aaKnown RBP13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 ESPL1Q14674 2120 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 ZNF816-ZNF321PA0A0X1KG74 233 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 ANGPTL7O43827 346 aa13.08□□□□□ -0.32
CLPTM1-202ENST00000541297 CDC14BO60729 498 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms