RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ZNF788Q6ZQV5 615 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 UBALD2Q8IYN6 164 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 RAB37Q96AX2 223 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 AMDHD2Q9Y303 409 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 P2RY1P47900 373 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 TNFAIP6P98066 277 aaPredicted RBP8.81□□□□□ -1
COL4A6-208ENST00000538570 TDHQ8IZJ6 230 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 TECRQ9NZ01 308 aaKnown RBP8.81□□□□□ -1
COL4A6-208ENST00000538570 MYF5P13349 255 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 CEACAM3P40198 252 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 TMEM33P57088 247 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 COX19Q49B96 90 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 NIT1Q86X76 327 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 CXXC4Q9H2H0 198 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 PLA2G3Q9NZ20 509 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 UQCR10Q9UDW1 63 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 CXorf51AA0A1B0GTR3 108 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 METTL12A8MUP2 240 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 MFNGO00587 321 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 HPXP02790 462 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 CKS1BP61024 79 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 SPEM1Q8N4L4 309 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 ADAT3Q96EY9 351 aaPredicted RBP8.81□□□□□ -1
COL4A6-208ENST00000538570 ELF5Q9UKW6 265 aaPredicted RBP8.81□□□□□ -1
COL4A6-208ENST00000538570 A0A1W2PR80 420 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 MVDP53602 400 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 TM4SF19Q96DZ7 209 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 ADTRPQ96IZ2 230 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 CLDN16Q9Y5I7 305 aa8.81□□□□□ -1
COL4A6-208ENST00000538570 COL16A1Q07092 1604 aaPredicted RBP8.81□□□□□ -1
COL4A6-208ENST00000538570 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
COL4A6-208ENST00000538570 PRICKLE4Q2TBC4 344 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 ZNF362Q5T0B9 420 aaPredicted RBP8.8□□□□□ -1
COL4A6-208ENST00000538570 ASCL4Q6XD76 172 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 OR10G8Q8NGN5 311 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 OR4S2Q8NH73 311 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 GNRHR2Q96P88 292 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 SIGMAR1Q99720 223 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 CTSDP07339 412 aaPredicted RBP8.8□□□□□ -1
COL4A6-208ENST00000538570 CSN3P07498 182 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 COX7A1P24310 79 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 ANKRD55Q3KP44 614 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 ANKRD37Q7Z713 158 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 SFTPA2Q8IWL1 248 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 SFTPA1Q8IWL2 248 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 OR1L6Q8NGR2 347 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 MRGPRDQ8TDS7 321 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 SRD5A3Q9H8P0 318 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 V9GYH0 126 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 K7EQS6 105 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 IGFBP6P24592 240 aaPredicted RBP8.8□□□□□ -1
COL4A6-208ENST00000538570 ACP1P24666 158 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 KLF3P57682 345 aaPredicted RBP8.8□□□□□ -1
COL4A6-208ENST00000538570 ACER2Q5QJU3 275 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 CCL17Q92583 94 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 SLC26A1Q9H2B4 701 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 PRSS50Q9UI38 385 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 PLCH1Q4KWH8 1693 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 ARID1BQ8NFD5 2236 aaPredicted RBP8.8□□□□□ -1
COL4A6-208ENST00000538570 PLPP3O14495 311 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 FZD5Q13467 585 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 TRA2AQ13595 282 aaKnown RBP eCLIP8.8□□□□□ -1
COL4A6-208ENST00000538570 ZNF343Q6P1L6 599 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 CD300LDQ6UXZ3 194 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 C12orf54Q6X4T0 127 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 TBC1D26Q86UD7 250 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 TMEM30AQ9NV96 361 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 OR5B21A6NL26 309 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 RIGQ13278 110 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 TNXAQ16473 311 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 RIPPLY2Q5TAB7 128 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 SLC35E4Q6ICL7 350 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 ZNF880Q6PDB4 577 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 ZNF793Q6ZN11 406 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 RGP1Q92546 391 aaPredicted RBP8.8□□□□□ -1
COL4A6-208ENST00000538570 ANGPTL4Q9BY76 406 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 CACNA1SQ13698 1873 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 H3BQ15 152 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 LMX1BO60663 402 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 OR4A8P0C604 315 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 WNT3P56703 355 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 TGIF2LYQ8IUE0 185 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 DEFB123Q8N688 67 aa8.8□□□□□ -1
COL4A6-208ENST00000538570 PHIPQ8WWQ0 1821 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 ERVH48-1M5A8F1 160 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 GSTZ1O43708 216 aaPredicted RBP8.79□□□□□ -1
COL4A6-208ENST00000538570 CDKN2AP42771 156 aaKnown RBP8.79□□□□□ -1
COL4A6-208ENST00000538570 GVQW1Q8N7I0 195 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 VSTM2AQ8TAG5 236 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 MAST2Q6P0Q8 1798 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 KIAA0100Q14667 2235 aaKnown RBP8.79□□□□□ -1
COL4A6-208ENST00000538570 IGSF23A1L1A6 192 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 C11orf94C9JXX5 98 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 CTDSPLO15194 276 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 ACTL6AO96019 429 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 IL11RAQ14626 422 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 ZNF770Q6IQ21 691 aaPredicted RBP8.79□□□□□ -1
COL4A6-208ENST00000538570 KCNK15Q9H427 330 aa8.79□□□□□ -1
COL4A6-208ENST00000538570 FER1L6Q2WGJ9 1857 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms