RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SNX24Q9Y343 169 aa2.82□□□□□ -1.96
YBX3-205ENST00000536107 RHBDD3Q9Y3P4 386 aa2.82□□□□□ -1.96
YBX3-205ENST00000536107 TMED3Q9Y3Q3 217 aa2.82□□□□□ -1.96
YBX3-205ENST00000536107 JRKLQ9Y4A0 524 aa2.82□□□□□ -1.96
YBX3-205ENST00000536107 SELENOKQ9Y6D0 94 aa2.82□□□□□ -1.96
YBX3-205ENST00000536107 A3GALT2U3KPV4 340 aa2.82□□□□□ -1.96
YBX3-205ENST00000536107 C13orf42A0A1B0GVH6 325 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 TMEM120BA0PK00 339 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 NPIPB13A6NJU9 1138 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 NPIPB4C9JG80 1138 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 BMPR1BO00238 502 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 ATP6V0E1O15342 81 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 EIF3HO15372 352 aaKnown RBP eCLIP2.81□□□□□ -1.96
YBX3-205ENST00000536107 TPST1O60507 370 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 NXPH2O95156 264 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 IGLV1-47P01700 117 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 IGHV3-7P01780 117 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 AMBPP02760 352 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 MYL2P10916 166 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 SLC2A1P11166 492 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 GABRR1P24046 479 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 FCGR2BP31994 310 aaPredicted RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 S100A3P33764 101 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 OR1E2P47887 323 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 RAB7AP51149 207 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 CRIP2P52943 208 aaPredicted RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 CLDN8P56748 225 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 CALCOCO2Q13137 446 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 PRDX4Q13162 271 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 MADCAM1Q13477 382 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 EIF2B1Q14232 305 aaKnown RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 FCN2Q15485 313 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 SNCBQ16143 134 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 MEP1BQ16820 701 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 RSPO1Q2MKA7 263 aaPredicted RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 ANKRD55Q3KP44 614 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 LELP1Q5T871 98 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 ZNF613Q6PF04 617 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 HAGHLQ6PII5 290 aaPredicted RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 ASCL4Q6XD76 172 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 LINC00346Q8IVM7 164 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 OR8H3Q8N146 312 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 ZNF485Q8NCK3 441 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 OR8J2Q8NGG1 315 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 OR4D6Q8NGJ1 314 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 OR13C5Q8NGS8 318 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 TWIST2Q8WVJ9 160 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 PIGCQ92535 297 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 ZNF488Q96MN9 340 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 OR8B4Q96RC9 309 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 ATG101Q9BSB4 218 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 NICN1Q9BSH3 213 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 TUBB1Q9H4B7 451 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 RAD21L1Q9H4I0 556 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 WDR55Q9H6Y2 383 aaPredicted RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 GRHPRQ9UBQ7 328 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 ENPP5Q9UJA9 477 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 SLC7A7Q9UM01 511 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 FOXA2Q9Y261 457 aaPredicted RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 UBE2J1Q9Y385 318 aaPredicted RBP2.81□□□□□ -1.96
YBX3-205ENST00000536107 LHFPL6Q9Y693 200 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 LINC00312Q9Y6C7 94 aa2.81□□□□□ -1.96
YBX3-205ENST00000536107 FAT3Q8TDW7 4589 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 TRGV10A0A0A0MS01 117 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 KIR2DL5BA0A0G2JN68 375 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 KIR2DL5BA0A0G2JPC4 375 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 NBDYA0A0U1RRE5 68 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 ZNF732B4DXR9 585 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 PRYO14603 147 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 XRCC2O43543 280 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 AIREO43918 545 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 TPST2O60704 377 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 ANP32DO95626 131 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 MOSP00540 346 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 HLA-DQA2P01906 255 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 CD74P04233 296 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 ANXA2P07355 339 aaKnown RBP2.8□□□□□ -1.96
YBX3-205ENST00000536107 SCTP09683 121 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 BLVRBP30043 206 aaPredicted RBP2.8□□□□□ -1.96
YBX3-205ENST00000536107 MAGEA12P43365 314 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 REG1BP48304 166 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 PRKXP51817 358 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 NAA20P61599 178 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 HIST1H3AP68431 136 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 MAD2L1Q13257 205 aaPredicted RBP2.8□□□□□ -1.96
YBX3-205ENST00000536107 DIAPH2-AS1Q14236 149 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 CASP8Q14790 479 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 GRK1Q15835 563 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 RPEL1Q2QD12 228 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 DEFB114Q30KQ6 69 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 RNF212Q495C1 297 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 SPANXN4Q5MJ08 99 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 ENTPD8Q5MY95 495 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 C6orf136Q5SQH8 315 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 C6orf10Q5SRN2 563 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 HIST2H3PS2Q5TEC6 136 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 HIST2H3AQ71DI3 136 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 TCF23Q7RTU1 214 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 KIR2DL5AQ8N109 375 aa2.8□□□□□ -1.96
YBX3-205ENST00000536107 CCDC63Q8NA47 563 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms