RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 IGLL5B9A064 214 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM250H0YL14 139 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 ISLRO14498 428 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 SYNGR1O43759 233 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 TNFAIP8O95379 198 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 EPPINO95925 133 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 NRASP01111 189 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 HRASP01112 189 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 KRASP01116 189 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 PFN1P07737 140 aaKnown RBP2.1□□□□□ -2.07
PRKDC-205ENST00000535375 SOD3P08294 240 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 LIMS3P0CW19 117 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 LIMS4P0CW20 117 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM241Q24JQ0 296 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 PDPK2PQ6A1A2 396 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 ZFAND6Q6FIF0 208 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 USP50Q70EL3 339 aaPredicted RBP2.1□□□□□ -2.07
PRKDC-205ENST00000535375 SSX7Q7RTT5 188 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 MARCH3Q86UD3 253 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 OR7G1Q8NGA0 311 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 OR6K3Q8NGY3 331 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 OR8S1Q8NH09 359 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 MRAP2Q96G30 205 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 OLFM3Q96PB7 478 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 SEC22CQ9BRL7 303 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 BBS2Q9BXC9 721 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 ZNF436Q9C0F3 470 aaPredicted RBP2.1□□□□□ -2.07
PRKDC-205ENST00000535375 SLC25A31Q9H0C2 315 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 DSN1Q9H410 356 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 EURLQ9NYK6 297 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 TAS2R13Q9NYV9 303 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 SCML1Q9UN30 329 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 ZNF780BQ9Y6R6 833 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 LOXHD1Q8IVV2 1947 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 SEC16AO15027 2179 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 TRIP11Q15643 1979 aa2.1□□□□□ -2.07
PRKDC-205ENST00000535375 A0A1W2PRG6 482 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 C8orf87E5RJ46 101 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 H3BP45 60 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 IGHG2P01859 326 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 INAFM2P0DMQ5 153 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 PTHLHP12272 177 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 PSMB9P28065 219 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 HLA-DMAP28067 261 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 PSMB6P28072 239 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 NUDT2P50583 147 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 ENDOGQ14249 297 aaKnown RBP2.09□□□□□ -2.07
PRKDC-205ENST00000535375 DEFB134Q4QY38 66 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 DGAT2L6Q6ZPD8 337 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 CLEC20AQ6ZU45 233 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 TMEM144Q7Z5S9 345 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 DYNC2LI1Q8TCX1 351 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 RNASEH2CQ8TDP1 164 aaKnown RBP2.09□□□□□ -2.07
PRKDC-205ENST00000535375 CCDC127Q96BQ5 260 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 DDIT4LQ96D03 193 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 FXYD5Q96DB9 178 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 PGLYRP3Q96LB9 341 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 FAM210AQ96ND0 272 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 LINC01587Q99440 93 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 VSIRQ9H7M9 311 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 TRIM45Q9H8W5 580 aaPredicted RBP2.09□□□□□ -2.07
PRKDC-205ENST00000535375 INIPQ9NRY2 104 aa2.09□□□□□ -2.07
PRKDC-205ENST00000535375 PLXNB3Q9ULL4 1909 aa2.09□□□□□ -2.08
PRKDC-205ENST00000535375 NUP153P49790 1475 aaKnown RBP2.08□□□□□ -2.08
PRKDC-205ENST00000535375 DYSFO75923 2080 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 MYO15BQ96JP2 1530 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 IGKV1OR2-108A0A075B7D4 117 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 IGHV3-21A0A0B4J1V1 117 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 I3L4J1 428 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 J3QLI3 93 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 SULT1C2O00338 296 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 UGT2B11O75310 529 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 CGB3P0DN86 165 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 CGB7P0DN87 165 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 BIKQ13323 160 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 GOLGA7BQ2TAP0 167 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 DPPA2Q7Z7J5 298 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 SPATA24Q86W54 205 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 ZFP82Q8N141 532 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 OR4C13Q8NGP0 309 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 LRRC45Q96CN5 670 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 APOL4Q9BPW4 351 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 PRSS27Q9BQR3 290 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 FAAP24Q9BTP7 215 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 TAPBPLQ9BX59 468 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 C14orf166Q9Y224 244 aaKnown RBP2.08□□□□□ -2.08
PRKDC-205ENST00000535375 BAZ2AQ9UIF9 1905 aaKnown RBP2.08□□□□□ -2.08
PRKDC-205ENST00000535375 OTOGLQ3ZCN5 2332 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 POLR3AO14802 1390 aaPredicted RBP2.08□□□□□ -2.08
PRKDC-205ENST00000535375 RAB3GAP2Q9H2M9 1393 aa2.08□□□□□ -2.08
PRKDC-205ENST00000535375 ITGB4P16144 1822 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 BAZ1BQ9UIG0 1483 aaKnown RBP2.07□□□□□ -2.08
PRKDC-205ENST00000535375 TICRRQ7Z2Z1 1910 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 TRAV8-2A0A0B4J237 113 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 F8VZ95 297 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 SMLR1H3BR10 107 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 CALUO43852 315 aaPredicted RBP2.07□□□□□ -2.08
PRKDC-205ENST00000535375 MPZL2O60487 215 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 CDK14O94921 469 aa2.07□□□□□ -2.08
PRKDC-205ENST00000535375 SNAP29O95721 258 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms