RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 SLC25A1P53007 311 aa10.84□□□□□ -0.67
PCDHGA6-201ENST00000517434 ZNF124Q15973 351 aa10.84□□□□□ -0.67
PCDHGA6-201ENST00000517434 MRPS24Q96EL2 167 aaKnown RBP10.84□□□□□ -0.67
PCDHGA6-201ENST00000517434 GGACTQ9BVM4 153 aa10.84□□□□□ -0.67
PCDHGA6-201ENST00000517434 ALX4Q9H161 411 aaPredicted RBP10.84□□□□□ -0.67
PCDHGA6-201ENST00000517434 FSCN3Q9NQT6 498 aa10.84□□□□□ -0.67
PCDHGA6-201ENST00000517434 FGF5P12034 268 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 PRF1P14222 555 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 SLC38A11Q08AI6 406 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 ZNF793Q6ZN11 406 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 C4orf45Q96LM5 186 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 MS4A5Q9H3V2 200 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 FAM60AQ9NP50 221 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 CFDP00746 253 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 SURF2Q15527 256 aaPredicted RBP10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 C17orf78Q8N4C9 275 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 NAA60Q9H7X0 242 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 UQCR10Q9UDW1 63 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 SOX15O60248 233 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 PPP1CAP62136 330 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 ZNF343Q6P1L6 599 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 SLC25A42Q86VD7 318 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 C17orf47Q8NEP4 570 aa10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 ZCCHC14Q8WYQ9 949 aaKnown RBP10.83□□□□□ -0.68
PCDHGA6-201ENST00000517434 A0A0B4J2E0 115 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 A0A1B0GX12 115 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 LINC00587B1AMM8 73 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 SP1P08047 785 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 ZNF880Q6PDB4 577 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 BHLHA15Q7RTS1 189 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 SAP25Q8TEE9 199 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 AMMECR1Q9Y4X0 333 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 HS3ST1O14792 307 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 RHBDL1O75783 438 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 FGF2P09038 288 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 KHDC3LQ587J8 217 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 DMKNQ6E0U4 476 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 ZNF441Q8N8Z8 693 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 OR5D13Q8NGL4 314 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 OTOSQ8NHW6 89 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 SIGLEC7Q9Y286 467 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 BRWD1Q9NSI6 2320 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 C16orf97H3BN30 126 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 DEDDO75618 318 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 CDC34P49427 236 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 PCBP3P57721 371 aaKnown RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 GAB4Q2WGN9 574 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 PABPC1L2AQ5JQF8 200 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 C12orf54Q6X4T0 127 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 MRGPRGQ86SM5 289 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 GPR61Q9BZJ8 451 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 LPAR5Q9H1C0 372 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 DOK5Q9P104 306 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 TRGC2P03986 189 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 CYB5R2Q6BCY4 276 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 OR4A4PQ8NGN8 299 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 WDR61Q9GZS3 305 aaKnown RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 LSM2Q9Y333 95 aaKnown RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 COL11A1P12107 1806 aaPredicted RBP10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 DOCK3Q8IZD9 2030 aa10.82□□□□□ -0.68
PCDHGA6-201ENST00000517434 SPAG17Q6Q759 2223 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 CXorf65A6NEN9 183 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 SPRY3O43610 288 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 ZFP36L2P47974 494 aaKnown RBP10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 C8orf82Q6P1X6 216 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 TAAR6Q96RI8 345 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 MAP1LC3CQ9BXW4 147 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 COMMD5Q9GZQ3 224 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 CA10Q9NS85 328 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 OR6C3Q9NZP0 311 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 ING1Q9UK53 422 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 ST3GAL6Q9Y274 331 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 ZNF835Q9Y2P0 537 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 PLXNB2O15031 1838 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 ADAM11O75078 769 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 HLA-GP17693 338 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 CSRP1P21291 193 aaKnown RBP10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 ERHP84090 104 aaKnown RBP10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 RDH5Q92781 318 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 TLNRD1Q9H1K6 362 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 FER1L6Q2WGJ9 1857 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 HTR1DP28221 377 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 TNFAIP6P98066 277 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 NHLRC3Q5JS37 347 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 OSR2Q8N2R0 312 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 OR10G4Q8NGN3 311 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 OR10G9Q8NGN4 311 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 OR10G7Q8NGN6 311 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 OR1P1Q8NH06 330 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 ACY3Q96HD9 319 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 SLC25A22Q9H936 323 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 SLC45A2Q9UMX9 530 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 SHROOM3Q8TF72 1996 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 EPOPA6NHQ4 379 aa10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 SH2D7A6NKC9 451 aaPredicted RBP10.81□□□□□ -0.68
PCDHGA6-201ENST00000517434 NPIPB9F8W1W9 429 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms