RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 PMELP40967 661 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 MED21Q13503 144 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 LRRC26Q2I0M4 334 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 SDHAF4Q5VUM1 108 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 CLEC20AQ6ZU45 233 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 MTERF4Q7Z6M4 381 aaKnown RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 HMGN2P46Q86SG4 172 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 C10orf107Q8IVU9 208 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF615Q8N8J6 731 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 ATP6V1C2Q8NEY4 427 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 SUN5Q8TC36 379 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 SCGB1C1Q8TD33 95 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 DTD1Q8TEA8 209 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 DNAJB3Q8WWF6 145 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 ITLN2Q8WWU7 325 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 UPF3BQ9BZI7 483 aaKnown RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 ING2Q9H160 280 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 OR51E2Q9H255 320 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 CYTL1Q9NRR1 136 aa3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 C14orf166Q9Y224 244 aaKnown RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF706Q9Y5V0 76 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 POLR3AO14802 1390 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P47-201ENST00000511281 IGHV3-43A0A0B4J1X8 118 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 FTCDNL1E5RQL4 147 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 GPR171O14626 319 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 LIN7AO14910 233 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 FSTL3O95633 263 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 HLA-AP01891 365 aaKnown RBP3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF286BP0CG31 522 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 SPNP16150 400 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 AKR1C4P17516 323 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 ATF1P18846 271 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 PYCR1P32322 319 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 KPRPQ5T749 579 aaPredicted RBP3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 TBPL2Q6SJ96 375 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 LINC01587Q99440 93 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 ZNF835Q9Y2P0 537 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 SLC22A7Q9Y694 548 aa3.09□□□□□ -1.91
HMGB1P47-201ENST00000511281 A0A0A6YYH2 397 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 A6NJ64 397 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 ZNF98A6NK75 572 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 EFCAB9A8MZ26 197 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 MFNGO00587 321 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 RBBP9O75884 186 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 IGLV7-43P04211 117 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 PET100P0DJ07 73 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 PTHLHP12272 177 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 HIST1H1CP16403 213 aaKnown RBP3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 MGAT3Q09327 533 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 DRAM2Q6UX65 266 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 GATD1Q8NB37 220 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 OR52E4Q8NGH9 312 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 TWIST2Q8WVJ9 160 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 CLDN23Q96B33 292 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 ANAPC13Q9BS18 74 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 ZNF436Q9C0F3 470 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 METTL17Q9H7H0 456 aaPredicted RBP3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 TBL2Q9Y4P3 447 aaKnown RBP3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 PLXNB3Q9ULL4 1909 aa3.08□□□□□ -1.92
HMGB1P47-201ENST00000511281 IGLV2-18A0A075B6J9 118 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 IGLL5B9A064 214 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 KCNK2O95069 426 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 ZNF235Q14590 738 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 PAFAH1B3Q15102 231 aaKnown RBP3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 TTMPQ5BVD1 217 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 DNLZQ5SXM8 178 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 ZFAND6Q6FIF0 208 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 SPINT4Q6UDR6 99 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 CASP12Q6UXS9 341 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 DPPA2Q7Z7J5 298 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 DAZ4Q86SG3 579 aaKnown RBP3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 OR4P4Q8NGL7 312 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 OR2K2Q8NGT1 345 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 STOML3Q8TAV4 291 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 FXYD5Q96DB9 178 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 DAZ1Q9NQZ3 744 aaKnown RBP3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 INIPQ9NRY2 104 aa3.07□□□□□ -1.92
HMGB1P47-201ENST00000511281 ADAP1O75689 374 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 GTF2F2P13984 249 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 PVALBP20472 110 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 CBX5P45973 191 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 ZNF83P51522 516 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 EIF4EBP2Q13542 120 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 FAM53BQ14153 422 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 ENDOGQ14249 297 aaKnown RBP3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 PTPRKQ15262 1439 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 TMEM241Q24JQ0 296 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 CLEC12BQ2HXU8 276 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 NXNL2Q5VZ03 156 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 FAM151BQ6UXP7 276 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 MARCH3Q86UD3 253 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 SLC13A5Q86YT5 568 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 PLCZ1Q86YW0 608 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 FUNDC1Q8IVP5 155 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 BLIDQ8IZY5 108 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 OR8S1Q8NH09 359 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 DDI1Q8WTU0 396 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 GPR22Q99680 433 aa3.06□□□□□ -1.92
HMGB1P47-201ENST00000511281 DCUN1D5Q9BTE7 237 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms