RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 RTN4IP1Q8WWV3 396 aaPredicted RBP9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 LINC00470Q9BZP3 86 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 PLSCR2Q9NRY7 297 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 GPR173Q9NS66 373 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 AK3Q9UIJ7 227 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 SLC7A11Q9UPY5 501 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM96BQ9Y3D0 163 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 MYO7BQ6PIF6 2116 aa9.49□□□□□ -0.89
SH3RF1-203ENST00000508685 IGKV1D-8A0A087WSZ0 117 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 C1QTNF9BB2RNN3 333 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 ST8SIA3O43173 380 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 CRYBA1P05813 215 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 C1QTNF9P0C862 333 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 CHATP28329 748 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 IGFL2Q6UWQ7 119 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 MCEMP1Q8IX19 187 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 RXFP4Q8TDU9 374 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 MRPL24Q96A35 216 aaKnown RBP9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 C18orf12Q96KH6 178 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 FAAP24Q9BTP7 215 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 ADAT1Q9BUB4 502 aaKnown RBP9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 PBDC1Q9BVG4 233 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 PIGBOS1A0A0B4J2F0 54 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 A0A1B0GW64 132 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 MEX3AA1L020 520 aaKnown RBP9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 SLC22A20A6NK97 555 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 COLCA2A8K830 154 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM157AC9JC47 383 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 RPL36A-HNRNPH2H7BZ11 118 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 NRASP01111 189 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 MBPP02686 304 aaPredicted RBP9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 SPP1P10451 314 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 CCL2P13500 99 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 SNCAP37840 140 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 AKR1D1P51857 326 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 MALLQ13021 153 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 TAF9Q16594 264 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 SRSF7Q16629 238 aaKnown RBP eCLIP9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 NRN1LQ496H8 165 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 OSR2Q8N2R0 312 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 ABHD14BQ96IU4 210 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 CACFD1Q9UGQ2 172 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 PRSS50Q9UI38 385 aa9.48□□□□□ -0.89
SH3RF1-203ENST00000508685 EPG5Q9HCE0 2579 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM230AA0A1W2PPH8 454 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 TMEM8BA6NDV4 472 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A10PA6NDY2 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A18PA6NE21 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A16PA6NEW6 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A20PA6NIJ5 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A8PA6NJQ4 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A7PA6NKC0 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A22PA8MWA6 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A12PA8MX19 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A5PA8MXJ8 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A23PA8MXZ1 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 C1orf196B1AJZ1 125 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A15PP0C7V4 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A13PP0C7W8 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A14PP0C7W9 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 FAM90A24PP0C7X0 464 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 RCC1P18754 421 aaPredicted RBP9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 CCNOP22674 350 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF92Q03936 586 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 GNMTQ14749 295 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 RTP5Q14D33 572 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF561Q8N587 486 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 RSRP1Q9BUV0 290 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 MAP1BP46821 2468 aaKnown RBP9.47□□□□□ -0.89
SH3RF1-203ENST00000508685 ZNF891A8MT65 544 aaPredicted RBP9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 CDS2O95674 445 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 SCGB1D2O95969 90 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 F12P00748 615 aaPredicted RBP9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 OR5AC1P0C628 307 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 EDN3P14138 238 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 PTAFRP25105 342 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 RPL35P42766 123 aaKnown RBP9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 CAMLGP49069 296 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 HERV-K104P61576 105 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 RAB1AP62820 205 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 CTAG1AP78358 180 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 FBXW12Q6X9E4 464 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 Q6ZS49 121 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 GCNT2Q8N0V5 402 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 OR8G5Q8NG78 346 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 WNT2BQ93097 391 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 SPIN2AQ99865 258 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 SPIN2BQ9BPZ2 258 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 SLC2A9Q9NRM0 540 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 ATPIF1Q9UII2 106 aa9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 TNRC6AQ8NDV7 1962 aaKnown RBP9.46□□□□□ -0.89
SH3RF1-203ENST00000508685 PIEZO2Q9H5I5 2752 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 TRAV17A0A0B4J275 112 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 DUXBA0A1W2PPF3 345 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 XRCC2O43543 280 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 PDCD6O75340 191 aa9.46□□□□□ -0.9
SH3RF1-203ENST00000508685 S100A8P05109 93 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 997.1 ms