RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 TMBIM4Q9HC24 238 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 SLCO1B3Q9NPD5 702 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 SLC17A5Q9NRA2 495 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 FBXO6Q9NRD1 293 aaPredicted RBP2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 INIPQ9NRY2 104 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 MCUBQ9NWR8 336 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 RMND1Q9NWS8 449 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 SPANXCQ9NY87 97 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 SMPXQ9UHP9 88 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 OR52A1Q9UKL2 312 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 FBXL3Q9UKT7 428 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 TFR2Q9UP52 801 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 NUBP2Q9Y5Y2 271 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 BRCA2P51587 3418 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 MUC3AQ02505 3323 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 TAF1LQ8IZX4 1826 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 CNOT1A5YKK6 2376 aaKnown RBP2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 EP300Q09472 2414 aaPredicted RBP2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 FER1L6Q2WGJ9 1857 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 ABCB11O95342 1321 aa2.16□□□□□ -2.06
UBE2D3-225ENST00000508476 ASXL3Q9C0F0 2248 aa2.15□□□□□ -2.06
UBE2D3-225ENST00000508476 C5P01031 1676 aa2.15□□□□□ -2.06
UBE2D3-225ENST00000508476 QRICH2Q9H0J4 1663 aa2.15□□□□□ -2.06
UBE2D3-225ENST00000508476 PHF3Q92576 2039 aaKnown RBP2.15□□□□□ -2.06
UBE2D3-225ENST00000508476 IBTKQ9P2D0 1353 aaPredicted RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ZNF816-ZNF321PA0A0X1KG74 233 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 A0A1W2PPE3 182 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 LRP5LA4QPB2 252 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 OR11H12B2RN74 326 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 PLPP3O14495 311 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 TXNDC9O14530 226 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SLC22A1O15245 554 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 NUPL2O15504 423 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 CHST1O43916 411 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 TPST1O60507 370 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SLC16A7O60669 478 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 BANF1O75531 89 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 VAMP5O95183 116 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RAB36O95755 333 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 IFNA10P01566 189 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 IGKV4-1P06312 121 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 CRHP06850 196 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 KLK1P06870 262 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 KLK3P07288 261 aaPredicted RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 TFPTP0C1Z6 253 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 C8orf88P0DMB2 117 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 C1GALT1C1LP0DN25 315 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ABOP16442 354 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 HLA-GP17693 338 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RAB3AP20336 220 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 COX5AP20674 150 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 KITLGP21583 273 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 PSMB5P28074 263 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 COILP38432 576 aaPredicted RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 QARSP47897 775 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ERFP50548 548 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RAB13P51153 203 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RAB25P57735 213 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 TCTAP57738 103 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 LSM6P62312 80 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SELENBP1Q13228 472 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 TPBGQ13641 420 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ARHGAP11BQ3KRB8 267 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SPIN4Q56A73 249 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 PPM1LQ5SGD2 360 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 PRR9Q5T870 116 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RESP18Q5W5W9 173 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 LCN12Q6JVE5 192 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 FAHD1Q6P587 224 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ENPP6Q6UWR7 440 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 DRAM2Q6UX65 266 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 NPSR1Q6W5P4 371 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SLC36A1Q7Z2H8 476 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 LYG2Q86SG7 212 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 THOC6Q86W42 341 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ANGPTL5Q86XS5 388 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 NOXO1Q8NFA2 376 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 OR11H1Q8NG94 326 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 OR11H2Q8NH07 326 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 OR52P1PQ8NH57 321 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 OR10A6Q8NH74 314 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 LYPD6BQ8NI32 183 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 C1orf54Q8WWF1 131 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RERGQ96A58 199 aaPredicted RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 EXOSC8Q96B26 276 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 TLCD1Q96CP7 247 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 DNAJC19Q96DA6 116 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 MED8Q96G25 268 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 CNN2Q99439 309 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 RNF2Q99496 336 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SERPINI1Q99574 410 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 C12orf57Q99622 126 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 MRPL45Q9BRJ2 306 aaKnown RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SEC22CQ9BRL7 303 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 SLC19A3Q9BZV2 496 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ACTR3CQ9C0K3 210 aaPredicted RBP2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 ACTR6Q9GZN1 396 aa2.15□□□□□ -2.07
UBE2D3-225ENST00000508476 PPA2Q9H2U2 334 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms