RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 NUDT19A8MXV4 375 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 BCL3P20749 454 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 CD82P27701 267 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 EIF2S3LQ2VIR3 472 aaKnown RBP12.69□□□□□ -0.38
CHTOP-206ENST00000495554 SP6Q3SY56 376 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 Q6ZS49 121 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 TMPRSS7Q7RTY8 843 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 DPPA2Q7Z7J5 298 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 EXTL1Q92935 676 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 FGF23Q9GZV9 251 aaPredicted RBP12.69□□□□□ -0.38
CHTOP-206ENST00000495554 OR2S2Q9NQN1 319 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 NGFP01138 241 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 FAM157CP0CG43 387 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 RPL12P30050 165 aaKnown RBP12.69□□□□□ -0.38
CHTOP-206ENST00000495554 HERV-K104P61576 105 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 ZNF169Q14929 603 aaPredicted RBP12.69□□□□□ -0.38
CHTOP-206ENST00000495554 SRSF7Q16629 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHTOP-206ENST00000495554 PHLDA2Q53GA4 152 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 ZNF766Q5HY98 468 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 MKXQ8IYA7 352 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 BATF2Q8N1L9 274 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 OR5A2Q8NGI9 324 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
CHTOP-206ENST00000495554 HIST1H2AAQ96QV6 131 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 PRRX2Q99811 253 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 FAM86C1Q9NVL1 165 aa12.69□□□□□ -0.38
CHTOP-206ENST00000495554 ZNF732B4DXR9 585 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 WT1P19544 449 aaPredicted RBP12.68□□□□□ -0.38
CHTOP-206ENST00000495554 S100PP25815 95 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 TAS2R60P59551 318 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 BOLLQ8N9W6 283 aaKnown RBP12.68□□□□□ -0.38
CHTOP-206ENST00000495554 CCDC71LQ8N9Z2 235 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 ARL11Q969Q4 196 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 WDYHV1Q96HA8 205 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 RSRP1Q9BUV0 290 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 CRIM1Q9NZV1 1036 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 ZNF629Q9UEG4 869 aaPredicted RBP12.68□□□□□ -0.38
CHTOP-206ENST00000495554 CD300LBA8K4G0 201 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 TRAPPC2LH3BP13 241 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 SLC31A2O15432 143 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 PPYP01298 95 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 AADACP22760 399 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 RAB4BP61018 213 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 ARG2P78540 354 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 MPV17LQ2QL34 196 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 OR5T2Q8NGG2 359 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 GLYATL2Q8WU03 294 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 OR51M1Q9H341 326 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 TAF9BQ9HBM6 251 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 MTCH1Q9NZJ7 389 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 SPRR3Q9UBC9 169 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 LPAR3Q9UBY5 353 aa12.68□□□□□ -0.38
CHTOP-206ENST00000495554 APLNRP35414 380 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 RPL7L1Q6DKI1 246 aaKnown RBP12.67□□□□□ -0.38
CHTOP-206ENST00000495554 OR2A2Q6IF42 318 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 LGI3Q8N145 548 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 OR5L1Q8NGL2 311 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 MSI2Q96DH6 328 aaKnown RBP12.67□□□□□ -0.38
CHTOP-206ENST00000495554 C18orf12Q96KH6 178 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 PLEKHA2Q9HB19 425 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 ZFP57Q9NU63 452 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 RCC2Q9P258 522 aaKnown RBP12.67□□□□□ -0.38
CHTOP-206ENST00000495554 LSM5Q9Y4Y9 91 aaKnown RBP12.67□□□□□ -0.38
CHTOP-206ENST00000495554 ZNF705EA8MWA4 302 aaPredicted RBP12.67□□□□□ -0.38
CHTOP-206ENST00000495554 H7C1Q1 480 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 LRP3O75074 770 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 SCGB1D2O95969 90 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 NAPSAO96009 420 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 TNFSF10P50591 281 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 FBXW9Q5XUX1 488 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 LYZL2Q7Z4W2 148 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 SAT2Q96F10 170 aaPredicted RBP12.67□□□□□ -0.38
CHTOP-206ENST00000495554 LRRC46Q96FV0 321 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 ZDHHC11Q9H8X9 412 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 PRSS50Q9UI38 385 aa12.67□□□□□ -0.38
CHTOP-206ENST00000495554 CFAP47Q6ZTR5 3102 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 ZNF729A6NN14 1252 aaPredicted RBP12.66□□□□□ -0.38
CHTOP-206ENST00000495554 HSBP1L1C9JCN9 74 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 JTBO76095 146 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 IL18BPO95998 194 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 GAPDHP04406 335 aaKnown RBP12.66□□□□□ -0.38
CHTOP-206ENST00000495554 DEFA5Q01523 94 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 FAM185AQ8N0U4 392 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 OR1K1Q8NGR3 316 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 OR5P3Q8WZ94 311 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 PLK3Q9H4B4 646 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 C12orf49Q9H741 205 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 Q9N2K0 584 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 MPC1Q9Y5U8 109 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 PRRC2CQ9Y520 2896 aaKnown RBP12.66□□□□□ -0.38
CHTOP-206ENST00000495554 TRGV5A0A0B4J1U4 118 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 TMEM218A2RU14 115 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 E5RGE8 158 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 MBPP02686 304 aaPredicted RBP12.66□□□□□ -0.38
CHTOP-206ENST00000495554 TK1P04183 234 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 HIKESHIQ53FT3 197 aa12.66□□□□□ -0.38
CHTOP-206ENST00000495554 OR11L1Q8NGX0 322 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms