RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ASB17Q8WXJ9 295 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 NABP1Q96AH0 204 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 C12orf43Q96C57 262 aaKnown RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 SLC25A38Q96DW6 304 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF486Q96H40 463 aaPredicted RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 C18orf12Q96KH6 178 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 OR10C1Q96KK4 312 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 PGLYRP3Q96LB9 341 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF354BQ96LW1 612 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 RDH12Q96NR8 316 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 COL21A1Q96P44 957 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 DUX3Q96PT4 197 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF300Q96RE9 604 aaPredicted RBP2.31□□□□□ -2.04
HMGN4-202ENST00000477243 C20orf144Q9BQM9 153 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 TMED9Q9BVK6 235 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 TIPINQ9BVW5 301 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 KIFC1Q9BW19 673 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 OR11A1Q9GZK7 315 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 MS4A6AQ9H2W1 248 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ARMC1Q9NVT9 282 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 OR1A1Q9P1Q5 309 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 TBX21Q9UL17 535 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 TRAPPC4Q9Y296 219 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 POLR1DQ9Y2S0 133 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 NEUROG3Q9Y4Z2 214 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 ALG5Q9Y673 324 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 CACNA1IQ9P0X4 2223 aa2.31□□□□□ -2.04
HMGN4-202ENST00000477243 MYH3P11055 1940 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TTC3P53804 2025 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 FER1L5A0AVI2 2057 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 STAB2Q8WWQ8 2551 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 IGHV4-4A0A075B6R2 117 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TRGV8A0A0C4DH27 118 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 IGHV3-38A0A0C4DH36 116 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TEX48A0A1B0GUV7 120 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 D6RAR5 112 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 LINC01619G3V211 115 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 C15orf65H3BRN8 121 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 I3L4J1 428 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 HCRTR1O43613 425 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 NDUFA2O43678 99 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TRMUO75648 421 aaKnown RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 IGLV2-14P01704 120 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 IGHA1P01876 353 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 CRHP06850 196 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 CTSLP07711 333 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 CD37P11049 281 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 CD79AP11912 226 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 FOLR1P15328 257 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 GNB3P16520 340 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 AKR1C4P17516 323 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TNFRSF1BP20333 461 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 HIST1H1TP22492 207 aaPredicted RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 MPIP34949 423 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 CEACAM6P40199 344 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 MYCNOSP40205 109 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 RPL5P46777 297 aaKnown RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 CRYBA4P53673 196 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 CCL23P55773 120 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 RAB5BP61020 215 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 RAP1BP61224 184 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 MS4A2Q01362 244 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 FMODQ06828 376 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 PPP1R1AQ13522 171 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 PMVKQ15126 192 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 OR1Q1Q15612 314 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 SNRNP35Q16560 246 aaKnown RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 PRSS8Q16651 343 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 C4orf26Q17RF5 130 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 LRRC75BQ2VPJ9 315 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 ODF3L2Q3SX64 289 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TCEAL5Q5H9L2 206 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 WDR38Q5JTN6 314 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 C1orf146Q5VVC0 180 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 OTPQ5XKR4 325 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 KCTD16Q68DU8 428 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 BAIAP2L2Q6UXY1 529 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF788Q6ZQV5 615 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 FOXL2NBQ6ZUU3 175 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 SH2D5Q6ZV89 423 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 Q6ZVH6 145 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 TRPT1Q86TN4 253 aaKnown RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 COMMD7Q86VX2 200 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 DHFR2Q86XF0 187 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 GAPTQ8N292 157 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 ARRDC1Q8N5I2 433 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 ARIH2OSQ8N7S6 290 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 STPG4Q8N801 248 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 ZNF491Q8N8L2 437 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 OR4P4Q8NGL7 312 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 OR13A1Q8NGR1 328 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 OR52N1Q8NH53 320 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 OR1S1Q8NH92 325 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 OR10J5Q8NHC4 309 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 MFSD8Q8NHS3 518 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 NEIL3Q8TAT5 605 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 Q8WTZ3 238 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 BLNKQ8WV28 456 aa2.3□□□□□ -2.04
HMGN4-202ENST00000477243 SKA2Q8WVK7 121 aaPredicted RBP2.3□□□□□ -2.04
HMGN4-202ENST00000477243 QKIQ96PU8 341 aaKnown RBP eCLIP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms