RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 MOB4Q9Y3A3 225 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 HSPE1-MOB4S4R3N1 261 aa16.75■□□□□ 0.27
COL9A3-207ENST00000467819 COL7A1Q02388 2944 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 MEIKINA0A087WXM9 373 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 KBTBD11-OT1A0A1B0GTJ5 212 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 SNTNA6NMZ2 147 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 OOSP1A8MZH6 123 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 K7EIL1 84 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 M0QZK8 103 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 CLIC3O95833 236 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 DBTP11182 482 aaKnown RBP16.74■□□□□ 0.27
COL9A3-207ENST00000467819 MTNR1BP49286 362 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 GALEQ14376 348 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 ZSCAN26Q16670 478 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 LTC4SQ16873 150 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 PAN3Q58A45 887 aaKnown RBP16.74■□□□□ 0.27
COL9A3-207ENST00000467819 ZNF691Q5VV52 312 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 SERPINA12Q8IW75 414 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 OR13A1Q8NGR1 328 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 TSEN15Q8WW01 171 aaKnown RBP16.74■□□□□ 0.27
COL9A3-207ENST00000467819 RCC1LQ96I51 464 aaKnown RBP16.74■□□□□ 0.27
COL9A3-207ENST00000467819 INPP5EQ9NRR6 644 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 CALYQ9NYX4 217 aa16.74■□□□□ 0.27
COL9A3-207ENST00000467819 AMMECR1Q9Y4X0 333 aaPredicted RBP16.74■□□□□ 0.27
COL9A3-207ENST00000467819 PSMB11A5LHX3 300 aa16.73■□□□□ 0.27
COL9A3-207ENST00000467819 SNRNP70P08621 437 aaKnown RBP16.73■□□□□ 0.27
COL9A3-207ENST00000467819 FAM106CPP0CH98 169 aa16.73■□□□□ 0.27
COL9A3-207ENST00000467819 OSR2Q8N2R0 312 aa16.73■□□□□ 0.27
COL9A3-207ENST00000467819 OR51T1Q8NGJ9 327 aa16.73■□□□□ 0.27
COL9A3-207ENST00000467819 OR56B4Q8NH76 319 aa16.73■□□□□ 0.27
COL9A3-207ENST00000467819 PDCD1LG2Q9BQ51 273 aa16.73■□□□□ 0.27
COL9A3-207ENST00000467819 DHDHQ9UQ10 334 aa16.73■□□□□ 0.27
COL9A3-207ENST00000467819 E9PI62 339 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 E9PQ18 207 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 ZFPL1O95159 310 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 CGB3P0DN86 165 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 CGB7P0DN87 165 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 KRTAP10-11P60412 298 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 ZNF329Q86UD4 541 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 SYS1Q8N2H4 156 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 PARP16Q8N5Y8 322 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 ZNF565Q8N9K5 539 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 OR5AK2Q8NH90 309 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 GPER1Q99527 375 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 ZNF649Q9BS31 505 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 PCDHB16Q9NRJ7 776 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 IDI2-AS1Q9NZ38 188 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 GMPPBQ9Y5P6 360 aa16.72■□□□□ 0.27
COL9A3-207ENST00000467819 TRAV24A0A0B4J272 114 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 WI2-2373I1.2A0A1W2PRP0 233 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 TMEM212A6NML5 194 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 J3QR06 171 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 C21orf33P30042 268 aaPredicted RBP16.71■□□□□ 0.27
COL9A3-207ENST00000467819 HOXD3P31249 432 aaPredicted RBP16.71■□□□□ 0.27
COL9A3-207ENST00000467819 GNG10P50151 68 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 ALDH3A2P51648 485 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 DIAPH2-AS1Q14236 149 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 HES1Q14469 280 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 SATL1Q86VE3 508 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 DRAM1Q8N682 238 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 OR10K1Q8NGX5 313 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 RFESDQ8TAC1 157 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 CNIH3Q8TBE1 160 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 MRGPRDQ8TDS7 321 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 TNFAIP8L1Q8WVP5 186 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 MYCBPQ99417 103 aaPredicted RBP16.71■□□□□ 0.27
COL9A3-207ENST00000467819 FAM192AQ9GZU8 254 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 AMBNQ9NP70 447 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 DNAH9Q9NYC9 4486 aa16.71■□□□□ 0.27
COL9A3-207ENST00000467819 A0A1W2PPI3 338 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A18PA6NE21 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A16PA6NEW6 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A20PA6NIJ5 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A9PA6NNJ1 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A12PA8MX19 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A5PA8MXJ8 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 GABRPO00591 440 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 DUS4LO95620 317 aaKnown RBP16.7■□□□□ 0.26
COL9A3-207ENST00000467819 IL1AP01583 271 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 CCDC159P0C7I6 412 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A15PP0C7V4 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A13PP0C7W8 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A14PP0C7W9 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 FAM90A24PP0C7X0 464 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 TMEM11P17152 192 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 GABRB1P18505 474 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 PIGYQ3MUY2 71 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 DEFB121Q5J5C9 76 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 ELP2Q6IA86 826 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 THNSL2Q86YJ6 484 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 CBR4Q8N4T8 237 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 LINC00482Q8N8I6 264 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 PXT1Q8NFP0 134 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 OR51A2Q8NGJ7 313 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 PLPPR1Q8TBJ4 325 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 NOL4LQ96MY1 436 aaPredicted RBP16.7■□□□□ 0.26
COL9A3-207ENST00000467819 BARHL1Q9BZE3 327 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 ERVK13-1Q9NX77 482 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 PSG11Q9UQ72 335 aa16.7■□□□□ 0.26
COL9A3-207ENST00000467819 MAGEB3O15480 346 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms