RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 GNRHRP30968 328 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 SNAI3Q3KNW1 292 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF787Q6DD87 383 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ASCL4Q6XD76 172 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ODF3L1Q8IXM7 274 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF442Q9H7R0 627 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 WASF3Q9UPY6 502 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 MTCH2Q9Y6C9 303 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 PIAS3Q9Y6X2 628 aa11.86□□□□□ -0.51
PTPRE-204ENST00000455661 XIRP2A4UGR9 3374 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 CLEC18AA5D8T8 446 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 TCN2P20062 427 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 BTF3P20290 206 aaKnown RBP11.85□□□□□ -0.51
PTPRE-204ENST00000455661 VDAC1P21796 283 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 NUTF2P61970 127 aaKnown RBP11.85□□□□□ -0.51
PTPRE-204ENST00000455661 HIST1H3AP68431 136 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 C10orf128Q5T292 105 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 CLEC18CQ8NCF0 446 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 RBM24Q9BX46 236 aaKnown RBP11.85□□□□□ -0.51
PTPRE-204ENST00000455661 KNL1Q8NG31 2342 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 TRBV11-1A0A0K0K1C0 115 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 SNRPCP09234 159 aaKnown RBP11.85□□□□□ -0.51
PTPRE-204ENST00000455661 FKBP2P26885 142 aaKnown RBP11.85□□□□□ -0.51
PTPRE-204ENST00000455661 SLC10A1Q14973 349 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 RSPO4Q2I0M5 234 aaPredicted RBP11.85□□□□□ -0.51
PTPRE-204ENST00000455661 NAXEQ8NCW5 288 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 SCGB1C1Q8TD33 95 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 DDA1Q9BW61 102 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 MMP17Q9ULZ9 603 aa11.85□□□□□ -0.51
PTPRE-204ENST00000455661 IGLV3-32A0A0A0MS00 114 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 CCDC85CA6NKD9 419 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 TMEM50AO95807 157 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 IFNA1P01562 189 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
PTPRE-204ENST00000455661 CLN3Q13286 438 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 FAM69BQ5VUD6 431 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 OR2AE1Q8NHA4 323 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 OR2V1Q8NHB1 315 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 RNF138Q8WVD3 245 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 SIGLEC12Q96PQ1 595 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 CDCA3Q99618 268 aaPredicted RBP11.84□□□□□ -0.51
PTPRE-204ENST00000455661 MRPL37Q9BZE1 423 aaKnown RBP11.84□□□□□ -0.51
PTPRE-204ENST00000455661 SLC7A10Q9NS82 523 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 RNF150Q9ULK6 438 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 GAB2Q9UQC2 676 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 PCDH15Q96QU1 1955 aa11.84□□□□□ -0.51
PTPRE-204ENST00000455661 XKRY2A2RUG3 117 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.51
PTPRE-204ENST00000455661 DHHO43323 396 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 NXPH3O95157 252 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 NRASP01111 189 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 JMJD7P0C870 316 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 FOXL2P58012 376 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 COL10A1Q03692 680 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 ZFP36L1Q07352 338 aaKnown RBP11.83□□□□□ -0.51
PTPRE-204ENST00000455661 DEFB133Q30KQ1 61 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 NMSQ5H8A3 153 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 LCN15Q6UWW0 184 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 ANKRD37Q7Z713 158 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 NFAM1Q8NET5 270 aaPredicted RBP11.83□□□□□ -0.51
PTPRE-204ENST00000455661 OR2M3Q8NG83 312 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 TMEM54Q969K7 222 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 NABP1Q96AH0 204 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 MTIF3Q9H2K0 278 aaKnown RBP11.83□□□□□ -0.51
PTPRE-204ENST00000455661 ZNF665Q9H7R5 613 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 OR14J1Q9UGF5 321 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 VAX2Q9UIW0 290 aa11.83□□□□□ -0.51
PTPRE-204ENST00000455661 EXPH5Q8NEV8 1989 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 RALGAPA1Q6GYQ0 2036 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 LINC01565O15544 149 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 TK1P04183 234 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 PHYHD1Q5SRE7 291 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 FOXL2NBQ6ZUU3 175 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 SLC25A26Q70HW3 274 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 CA5BP1Q8WTZ4 195 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 MBD3L1Q8WWY6 194 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 POM121Q96HA1 1249 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 TMEM68Q96MH6 324 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 P4HTMQ9NXG6 502 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
PTPRE-204ENST00000455661 UNC80Q8N2C7 3258 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 IGKV1-12A0A0C4DH73 117 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 CEBPZOSA8MTT3 80 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 IGKV1D-12P01611 117 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 PTGDSP41222 190 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 OR1D5P58170 312 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 PDCD1Q15116 288 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 COA6Q5JTJ3 125 aaKnown RBP11.82□□□□□ -0.52
PTPRE-204ENST00000455661 MRGPRGQ86SM5 289 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 C17orf82Q86X59 251 aaPredicted RBP11.82□□□□□ -0.52
PTPRE-204ENST00000455661 PLXDC1Q8IUK5 500 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 CARFQ8N187 725 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 OR10G3Q8NGC4 313 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 ACY3Q96HD9 319 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 OR5B12Q96R08 314 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 RPRMQ9NS64 109 aa11.82□□□□□ -0.52
PTPRE-204ENST00000455661 NAT8Q9UHE5 227 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms