RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 A0A0G2JMP0 313 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 IGHV7-4-1A0A0J9YVY3 117 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 CENPVL3A0A0U1RRI6 287 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 A0A0X1KG70 313 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 FADS1O60427 444 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 IGLV1-47P01700 117 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 CFL1P23528 166 aaKnown RBP3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 ELK4P28324 431 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 VEGFCP49767 419 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 TCL1AP56279 114 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 ESRRGP62508 458 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 PAFAH1B3Q15102 231 aaKnown RBP3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 SSX1Q16384 188 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 SMUG1Q53HV7 270 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 TTMPQ5BVD1 217 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 SPIN3Q5JUX0 258 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 GFI1BQ5VTD9 330 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 SFXN4Q6P4A7 337 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 Q6ZR54 194 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 MYPOPQ86VE0 399 aaPredicted RBP3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 LINC01555Q8NAE3 123 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 FAM57AQ8TBR7 257 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 DTD1Q8TEA8 209 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 ZIM3Q96PE6 472 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 DOK1Q99704 481 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 ZNF717Q9BY31 904 aaPredicted RBP3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 NANOGQ9H9S0 305 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 WFDC1Q9HC57 220 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 HMG20AQ9NP66 347 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 FKBP14Q9NWM8 211 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 MMACHCQ9Y4U1 282 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 SCN2AQ99250 2005 aa3.54□□□□□ -1.84
TM9SF3-202ENST00000443638 FLT4P35916 1363 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 C2orf16Q68DN1 1984 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 IGKV1-6A0A0C4DH72 117 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 A6NDX4 124 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 EVPLLA8MZ36 301 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 CHST10O43529 356 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 GATBO75879 557 aaKnown RBP3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 KRT75O95678 551 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 CYB5R3P00387 301 aaPredicted RBP3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 APCSP02743 223 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 LINC00614P0C842 121 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 GABRA1P14867 456 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 CXCL2P19875 107 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 ALOX5APP20292 161 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 SKP2Q13309 424 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 TMED2Q15363 201 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 HIST3H3Q16695 136 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 ZNF774Q6NX45 483 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 ZNF773Q6PK81 442 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 FAM19A3Q7Z5A8 133 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 LINC00596Q86U02 117 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 COMMD7Q86VX2 200 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 NIT1Q86X76 327 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 ZNF584Q8IVC4 421 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 GID4Q8IVV7 300 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 Q8N9W7 124 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 TMEM161BQ8NDZ6 487 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 OR4K5Q8NGD3 323 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 OR11L1Q8NGX0 322 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 CYGBQ8WWM9 190 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 ASB17Q8WXJ9 295 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 TBL1XR1Q9BZK7 514 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 TLNRD1Q9H1K6 362 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 CENPHQ9H3R5 247 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 PARVAQ9NVD7 372 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 TMEM131Q92545 1883 aa3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 TET2Q6N021 2002 aaPredicted RBP3.53□□□□□ -1.84
TM9SF3-202ENST00000443638 LOC102724200A0A096LPH7 203 aaPredicted RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 TEX50A0A1B0GTY4 177 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 LGALS9O00182 355 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 ISLRO14498 428 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF207O43670 478 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 COX7A2P2O60397 106 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 EIF1BO60739 113 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 ARL6IP5O75915 188 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 IGKV1-39P01597 117 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 IGKV1D-39P04432 117 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 SNRPAP09012 282 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 ZNF708P17019 499 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 MYL12AP19105 171 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 CXCL3P19876 107 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 ME2P23368 584 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 IMPA1P29218 277 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 EIF1P41567 113 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 GNG10P50151 68 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 CCR6P51684 374 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 H2BFSP57053 126 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 OR4D2P58180 307 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 SYCNQ0VAF6 134 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 C1DQ13901 141 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 SNRNP35Q16560 246 aaKnown RBP3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 CENPWQ5EE01 88 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 UBE2NLQ5JXB2 153 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 C1orf195Q5TG92 126 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 FAM222AQ5U5X8 452 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 NT5DC3Q86UY8 548 aa3.52□□□□□ -1.85
TM9SF3-202ENST00000443638 LRRC25Q8N386 305 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms