RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 C9orf152Q5JTZ5 239 aa16.51■□□□□ 0.23
CPNE1-219ENST00000440240 ELP2Q6IA86 826 aa16.51■□□□□ 0.23
CPNE1-219ENST00000440240 LHFPL3Q86UP9 236 aa16.51■□□□□ 0.23
CPNE1-219ENST00000440240 PYDC1Q8WXC3 89 aa16.51■□□□□ 0.23
CPNE1-219ENST00000440240 RPEQ96AT9 228 aa16.51■□□□□ 0.23
CPNE1-219ENST00000440240 CPNE2Q96FN4 548 aaPredicted RBP16.51■□□□□ 0.23
CPNE1-219ENST00000440240 KIRREL1Q96J84 757 aa16.51■□□□□ 0.23
CPNE1-219ENST00000440240 ALG8Q9BVK2 526 aa16.51■□□□□ 0.23
CPNE1-219ENST00000440240 DNAH3Q8TD57 4116 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 MEIKINA0A087WXM9 373 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A18PA6NE21 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A16PA6NEW6 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A20PA6NIJ5 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 TMEM212A6NML5 194 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A9PA6NNJ1 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A12PA8MX19 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A5PA8MXJ8 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 E9PQ18 207 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 EI24O14681 340 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 MAGEB3O15480 346 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FADS2O95864 444 aaKnown RBP16.5■□□□□ 0.23
CPNE1-219ENST00000440240 MPIG6BO95866 241 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A15PP0C7V4 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A13PP0C7W8 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A14PP0C7W9 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 FAM90A24PP0C7X0 464 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 CGB3P0DN86 165 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 CGB7P0DN87 165 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 ALDH3A2P51648 485 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 ZIK1Q3SY52 487 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-219ENST00000440240 KHDC1LQ5JSQ8 128 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 ZNF691Q5VV52 312 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 OSR2Q8N2R0 312 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 PXT1Q8NFP0 134 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 OR5AK2Q8NH90 309 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 TOMM40LQ969M1 308 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 Q96MT0 163 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 NR1H4Q96RI1 486 aaPredicted RBP16.5■□□□□ 0.23
CPNE1-219ENST00000440240 PPIL3Q9H2H8 161 aaKnown RBP16.5■□□□□ 0.23
CPNE1-219ENST00000440240 INPP5EQ9NRR6 644 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 DHDHQ9UQ10 334 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 MOB4Q9Y3A3 225 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 HSPE1-MOB4S4R3N1 261 aa16.5■□□□□ 0.23
CPNE1-219ENST00000440240 SH2D7A6NKC9 451 aaPredicted RBP16.49■□□□□ 0.23
CPNE1-219ENST00000440240 J3QR06 171 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 MPZL2O60487 215 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 ZFPL1O95159 310 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 CCDC159P0C7I6 412 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 PAN3Q58A45 887 aaKnown RBP16.49■□□□□ 0.23
CPNE1-219ENST00000440240 CNIH3Q8TBE1 160 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 HAVCR2Q8TDQ0 301 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 LINC00574Q9H8X3 128 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 ISG20L2Q9H9L3 353 aaKnown RBP16.49■□□□□ 0.23
CPNE1-219ENST00000440240 CALYQ9NYX4 217 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 KIF25Q9UIL4 384 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 GMPPBQ9Y5P6 360 aa16.49■□□□□ 0.23
CPNE1-219ENST00000440240 PSMB11A5LHX3 300 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 HSPB6O14558 160 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 RAB3AP20336 220 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 GLP1RP43220 463 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 KCNJ3P48549 501 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 GBX2P52951 348 aaPredicted RBP16.48■□□□□ 0.23
CPNE1-219ENST00000440240 MADCAM1Q13477 382 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 C10orf99Q6UWK7 81 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 SLC16A12Q6ZSM3 486 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 GPER1Q99527 375 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 ERVK13-1Q9NX77 482 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 IDI2-AS1Q9NZ38 188 aa16.48■□□□□ 0.23
CPNE1-219ENST00000440240 TRAV24A0A0B4J272 114 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 IL1AP01583 271 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 RAB7AP51149 207 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 PAX5Q02548 391 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 IL13RA2Q14627 380 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 UTF1Q5T230 341 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 ZFP1Q6P2D0 407 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 OR10A7Q8NGE5 316 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 OR13A1Q8NGR1 328 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 TSEN15Q8WW01 171 aaKnown RBP16.47■□□□□ 0.23
CPNE1-219ENST00000440240 PDCD1LG2Q9BQ51 273 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 GPR61Q9BZJ8 451 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 AASSQ9UDR5 926 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 PSG11Q9UQ72 335 aa16.47■□□□□ 0.23
CPNE1-219ENST00000440240 NPIPB11E5RHQ5 1161 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 SNRNP70P08621 437 aaKnown RBP16.46■□□□□ 0.23
CPNE1-219ENST00000440240 GABRB1P18505 474 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 RAB40BQ12829 278 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 HES1Q14469 280 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 SATL1Q86VE3 508 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 OR8H3Q8N146 312 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 CBR4Q8N4T8 237 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 Q8NFD4 153 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 OR51D1Q8NGF3 324 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 OR56B4Q8NH76 319 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 RHOXF1Q8NHV9 184 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 TNFAIP8L1Q8WVP5 186 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 ZNF649Q9BS31 505 aa16.46■□□□□ 0.23
CPNE1-219ENST00000440240 E9PI62 339 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 K7EIL1 84 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 RSU1Q15404 277 aa16.45■□□□□ 0.22
CPNE1-219ENST00000440240 ZSCAN26Q16670 478 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms