RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 RBM14Q96PK6 669 aaKnown RBP13.61□□□□□ -0.23
CPSF4-203ENST00000430038 SLC25A33Q9BSK2 321 aa13.61□□□□□ -0.23
CPSF4-203ENST00000430038 LIN7BQ9HAP6 207 aa13.61□□□□□ -0.23
CPSF4-203ENST00000430038 RHOFQ9HBH0 211 aa13.61□□□□□ -0.23
CPSF4-203ENST00000430038 DHDHQ9UQ10 334 aa13.61□□□□□ -0.23
CPSF4-203ENST00000430038 KBTBD11-OT1A0A1B0GTJ5 212 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 ZNF729A6NN14 1252 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-203ENST00000430038 LEUTXA8MZ59 168 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 CDRT1O95170 752 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 CLIC3O95833 236 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 NFYBP25208 207 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 PTGFRP43088 359 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 MTNR1BP49286 362 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 RSBN1Q5VWQ0 802 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-203ENST00000430038 SATL1Q86VE3 508 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 PQLC1Q8N2U9 271 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 DTX3Q8N9I9 347 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 CHST4Q8NCG5 386 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 PXT1Q8NFP0 134 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 OR13C5Q8NGS8 318 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 RFESDQ8TAC1 157 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 ZNF596Q8TC21 504 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 STMN2Q93045 179 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 C9orf16Q9BUW7 83 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 JAM3Q9BX67 310 aa13.6□□□□□ -0.23
CPSF4-203ENST00000430038 FGF20Q9NP95 211 aaPredicted RBP13.6□□□□□ -0.23
CPSF4-203ENST00000430038 FUOMA2VDF0 154 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A18PA6NE21 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A16PA6NEW6 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A20PA6NIJ5 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A9PA6NNJ1 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A12PA8MX19 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A5PA8MXJ8 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 OR2F2O95006 317 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A15PP0C7V4 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A13PP0C7W8 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A14PP0C7W9 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 FAM90A24PP0C7X0 464 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 IGLL1P15814 213 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 GBX2P52951 348 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-203ENST00000430038 DOC2BQ14184 412 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 RBM39Q14498 530 aaKnown RBP13.59□□□□□ -0.23
CPSF4-203ENST00000430038 ARSJQ5FYB0 599 aaPredicted RBP13.59□□□□□ -0.23
CPSF4-203ENST00000430038 CCDC121Q6ZUS5 278 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 WFDC9Q8NEX5 89 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 OR4D6Q8NGJ1 314 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 TNFAIP8L1Q8WVP5 186 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 TSEN15Q8WW01 171 aaKnown RBP13.59□□□□□ -0.23
CPSF4-203ENST00000430038 PHF21AQ96BD5 680 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 LINC00574Q9H8X3 128 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 INPP5EQ9NRR6 644 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 CALYQ9NYX4 217 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 CLEC2DQ9UHP7 191 aa13.59□□□□□ -0.23
CPSF4-203ENST00000430038 MEIKINA0A087WXM9 373 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 A0A1W2PP11 408 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 A0A1W2PPE3 182 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 MAGEA13PA6NCF6 341 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 NPIPB11E5RHQ5 1161 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 J3QR06 171 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 MPZL2O60487 215 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 PEX14O75381 377 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 RAB3AP20336 220 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 BRS3P32247 399 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 LTC4SQ16873 150 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 PAN3Q58A45 887 aaKnown RBP13.58□□□□□ -0.24
CPSF4-203ENST00000430038 CENPVQ7Z7K6 275 aaPredicted RBP13.58□□□□□ -0.24
CPSF4-203ENST00000430038 MRGPRDQ8TDS7 321 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 MYDGFQ969H8 173 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 Q96MT0 163 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 AURKAIP1Q9NWT8 199 aaPredicted RBP13.58□□□□□ -0.24
CPSF4-203ENST00000430038 PSG11Q9UQ72 335 aa13.58□□□□□ -0.24
CPSF4-203ENST00000430038 RPL36Q9Y3U8 105 aaKnown RBP13.58□□□□□ -0.24
CPSF4-203ENST00000430038 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 TOR1AO14656 332 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 HTR3BO95264 441 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 RPSAP08865 295 aaKnown RBP13.57□□□□□ -0.24
CPSF4-203ENST00000430038 CCDC159P0C7I6 412 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 SSTR5P35346 364 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 GLP1RP43220 463 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 PRRX1P54821 245 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 KLHL22Q53GT1 634 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 FOXB2Q5VYV0 432 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 C16orf82Q7Z2V1 217 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 SUMF2Q8NBJ7 301 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 OR4F17Q8NGA8 305 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 OR9G1Q8NH87 305 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 OR4F4Q96R69 305 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 NCOR1P1Q9H4R4 102 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 IDI2-AS1Q9NZ38 188 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 OR6C3Q9NZP0 311 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 PCDHGB5Q9Y5G0 923 aa13.57□□□□□ -0.24
CPSF4-203ENST00000430038 OGG1O15527 345 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 XPNPEP2O43895 674 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 SNRNP70P08621 437 aaKnown RBP13.56□□□□□ -0.24
CPSF4-203ENST00000430038 RPS11P62280 158 aaKnown RBP eCLIP13.56□□□□□ -0.24
CPSF4-203ENST00000430038 PAX5Q02548 391 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 RPL22L1Q6P5R6 122 aaKnown RBP13.56□□□□□ -0.24
CPSF4-203ENST00000430038 DRAM1Q8N682 238 aa13.56□□□□□ -0.24
CPSF4-203ENST00000430038 ZNF485Q8NCK3 441 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms