RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SPRY3O43610 288 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 OR2A4O95047 310 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 IGHV1-46P01743 117 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 HLA-AP01891 365 aaKnown RBP12.81□□□□□ -0.36
ACTB-204ENST00000425660 OR4A8P0C604 315 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 GSTT2P0CG29 244 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 GZMKP49863 264 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 NKX2-5P52952 324 aaPredicted RBP12.81□□□□□ -0.36
ACTB-204ENST00000425660 PPP1R1AQ13522 171 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 PAN3Q58A45 887 aaKnown RBP12.81□□□□□ -0.36
ACTB-204ENST00000425660 ADAM5Q6NVV9 412 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 ZNF497Q6ZNH5 498 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 C20orf204Q6ZNR8 217 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 LYG2Q86SG7 212 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 ADAD2Q8NCV1 583 aaKnown RBP12.81□□□□□ -0.36
ACTB-204ENST00000425660 OR2AK2Q8NG84 335 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 CA5BP1Q8WTZ4 195 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 LRRC46Q96FV0 321 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 OR2A7Q96R45 310 aa12.81□□□□□ -0.36
ACTB-204ENST00000425660 ERRFI1Q9UJM3 462 aaPredicted RBP12.81□□□□□ -0.36
ACTB-204ENST00000425660 NBASA2RRP1 2371 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 hCG_1807616A0A1W2PRN6 198 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 C9orf170A2RU37 121 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.8□□□□□ -0.36
ACTB-204ENST00000425660 FABP7O15540 132 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 LHBP01229 141 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 TFF3Q07654 80 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 LRRC29Q8WV35 223 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 MITD1Q8WV92 249 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 ERGIC1Q969X5 290 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 TMEM230Q96A57 120 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 DLL4Q9NR61 685 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 MGAT4CQ9UBM8 478 aa12.8□□□□□ -0.36
ACTB-204ENST00000425660 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 SIRPB1O00241 398 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 PSPNO60542 156 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 GRNP28799 593 aaKnown RBP12.79□□□□□ -0.36
ACTB-204ENST00000425660 GMFBP60983 142 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 IL13RA1P78552 427 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 SPRNQ5BIV9 151 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 C12orf45Q8N5I9 185 aaPredicted RBP12.79□□□□□ -0.36
ACTB-204ENST00000425660 GCSAMQ8N6F7 178 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 BBC3Q96PG8 261 aaPredicted RBP12.79□□□□□ -0.36
ACTB-204ENST00000425660 KCNJ16Q9NPI9 418 aa12.79□□□□□ -0.36
ACTB-204ENST00000425660 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
ACTB-204ENST00000425660 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 VSTM5A8MXK1 200 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 DUS4LO95620 317 aaKnown RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 CD55P08174 381 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 GIPP09681 153 aaPredicted RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 CTXN2P0C2S0 81 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 ERP29P30040 261 aaKnown RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 KCNJ3P48549 501 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 HOXA4Q00056 320 aaPredicted RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 PAX5Q02548 391 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 BAMBIQ13145 260 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 HERPUD1Q15011 391 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 IGSF11Q5DX21 431 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 PLPPR1Q8TBJ4 325 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 Q8TCH9 128 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 ITLN1Q8WWA0 313 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 ASB13Q8WXK3 278 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 MOB3AQ96BX8 217 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 MBNL3Q9NUK0 354 aaKnown RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 PIPOXQ9P0Z9 390 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 RFPL4AA6NLU0 287 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 RFPL4AL1F8VTS6 287 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 CTSDP07339 412 aaPredicted RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 SCTP09683 121 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 RPS2P15880 293 aaKnown RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 AKR1C4P17516 323 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 TNFSF4P23510 183 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 FCGR2CP31995 323 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 GLP1RP43220 463 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 UCP3P55916 312 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 H2BFSP57053 126 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 TNFAIP6P98066 277 aaPredicted RBP12.78□□□□□ -0.36
ACTB-204ENST00000425660 KCNJ8Q15842 424 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 MOGAT3Q86VF5 341 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 GCM1Q9NP62 436 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 OR14J1Q9UGF5 321 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 MGAT4AQ9UM21 535 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 WIPI2Q9Y4P8 454 aa12.78□□□□□ -0.36
ACTB-204ENST00000425660 IGKV1-6A0A0C4DH72 117 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 C17orf100A8MU93 164 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 PRB1P04280 392 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 HLA-GP17693 338 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 EGR1P18146 543 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 RCC1P18754 421 aaPredicted RBP12.77□□□□□ -0.37
ACTB-204ENST00000425660 SERPINF1P36955 418 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.37
ACTB-204ENST00000425660 SUPT4H1P63272 117 aaKnown RBP12.77□□□□□ -0.37
ACTB-204ENST00000425660 C2orf68Q2NKX9 166 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 NLRC3Q7RTR2 1065 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 GALNT11Q8NCW6 608 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 OR4A4PQ8NGN8 299 aa12.77□□□□□ -0.37
ACTB-204ENST00000425660 LINC01560Q8TB33 94 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms