RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 POM121CA8CG34 1229 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 FAAP24Q9BTP7 215 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 NUP205Q92621 2012 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 GIPP09681 153 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 S100A4P26447 101 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 C1orf162Q8NEQ5 155 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 XRCC3O43542 346 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 THBDP07204 575 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 PMELP40967 661 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 SSBP1Q04837 148 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 TMEM182Q6ZP80 229 aaPredicted RBP14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 NRG4Q8WWG1 115 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 GLI4P10075 376 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 REG1BP48304 166 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 CNN1P51911 297 aaKnown RBP14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 PIGPP57054 158 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 ASB13Q8WXK3 278 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 FAM53CQ9NYF3 392 aa14.73□□□□□ -0.05
SYNGAP1-202ENST00000418600 IGKV3-7A0A075B6H7 116 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 TCRBV5S2A0A599 114 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 K7N7A8 449 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 TMUB2Q71RG4 321 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 KLF14Q8TD94 323 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 KRASP01116 189 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 SMIM10L1P0DMW3 83 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 SMIM10Q96HG1 83 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 TCF20Q9UGU0 1960 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 LALBAP00709 142 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 OPN1MWP04001 364 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 OPN1MW2P0DN77 364 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 OPN1MW3P0DN78 364 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 IGLV3-21P80748 117 aaPredicted RBP14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 AESQ08117 197 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 OR13F1Q8NGS4 319 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 M6PRP20645 277 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 SRSF6Q13247 344 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 LAMTOR1Q6IAA8 161 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 C3orf56Q8N813 242 aa14.72□□□□□ -0.05
SYNGAP1-202ENST00000418600 HRH1P35367 487 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 ZNF485Q8NCK3 441 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 A0A1W2PRX2 142 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 J3QR89 54 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 DUSP18Q8NEJ0 188 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 ONECUT2O95948 504 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 EFEMP2O95967 443 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 HTR1DP28221 377 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 TMEM45BQ96B21 275 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 SLC2A8Q9NY64 477 aa14.71□□□□□ -0.05
SYNGAP1-202ENST00000418600 SMLR1H3BR10 107 aa14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 NUPL2O15504 423 aaKnown RBP14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 SULT1A3P0DMM9 295 aa14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 SULT1A4P0DMN0 295 aa14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 ZNF260Q3ZCT1 412 aa14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 CHAC2Q8WUX2 184 aa14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 WDR61Q9GZS3 305 aaKnown RBP14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 FGF20Q9NP95 211 aaPredicted RBP14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 TMEM106BQ9NUM4 274 aa14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 V9GYS6 101 aa14.71□□□□□ -0.06
SYNGAP1-202ENST00000418600 PGA4P0DJD7 388 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 PGA3P0DJD8 388 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 CA7P43166 264 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 LYZP61626 148 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 RNFT1Q5M7Z0 435 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 SLC25A46Q96AG3 418 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 SLC25A6P12236 298 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 CCR6P51684 374 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 FCN2Q15485 313 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 DYNC2LI1Q8TCX1 351 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 IFITM5A6NNB3 132 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 CLEC2LP0C7M8 214 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 GLRX5Q86SX6 157 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 NFAM1Q8NET5 270 aaPredicted RBP14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 ARID2Q68CP9 1835 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 EPHA2P29317 976 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 FCER1GP30273 86 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 LINC00299Q6ZSB3 139 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 GCSAMQ8N6F7 178 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 APCDD1LQ8NCL9 501 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 HARBI1Q96MB7 349 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 C11orf54Q9H0W9 315 aaPredicted RBP14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 RASL12Q9NYN1 266 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 WISP1O95388 367 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 OR13C7P0DN81 318 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 CDK5Q00535 292 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 PRSS45Q7RTY3 260 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 OR51I2Q9H344 312 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 CSAG2Q9Y5P2 127 aa14.7□□□□□ -0.06
SYNGAP1-202ENST00000418600 CPN1P15169 458 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 USF1P22415 310 aaPredicted RBP14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 OR4S1Q8NGB4 309 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 PRDM14Q9GZV8 571 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 ADGRL4Q9HBW9 690 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 MRPS18CQ9Y3D5 142 aaKnown RBP14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 MGST3O14880 152 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 IL5P05113 134 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 LINC00271P0C7V0 271 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 JUNBP17275 347 aaPredicted RBP14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 Q0VFX4 171 aa14.69□□□□□ -0.06
SYNGAP1-202ENST00000418600 BTN1A1Q13410 526 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms