RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SUMO3P55854 103 aaPredicted RBP10.61□□□□□ -0.71
UBR4-205ENST00000417040 FDX2Q6P4F2 183 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 PUSL1Q8N0Z8 303 aaKnown RBP10.61□□□□□ -0.71
UBR4-205ENST00000417040 CYB561D1Q8N8Q1 229 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 ASB5Q8WWX0 329 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 GPX7Q96SL4 187 aaPredicted RBP10.61□□□□□ -0.71
UBR4-205ENST00000417040 OCIAD1Q9NX40 245 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 ST6GALNAC2Q9UJ37 374 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 CCL27Q9Y4X3 112 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 RHBDL1O75783 438 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 FAM60AQ9NP50 221 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 CLN8Q9UBY8 286 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 A0A1B0GV90 55 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 DIRC3C9JPN6 131 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 NDUFB3O43676 98 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
UBR4-205ENST00000417040 WDR25Q64LD2 544 aaPredicted RBP10.61□□□□□ -0.71
UBR4-205ENST00000417040 TMEM116Q8NCL8 245 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 R3HDM4Q96D70 268 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 ZNF552Q9H707 407 aaPredicted RBP10.61□□□□□ -0.71
UBR4-205ENST00000417040 PARP11Q9NR21 331 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 ZNF260Q3ZCT1 412 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 GUSBP11Q6P575 273 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 DHRS13Q6UX07 377 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 VN1R4Q7Z5H5 301 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 TMEM251Q8N6I4 163 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 OR10D3Q8NH80 312 aa10.61□□□□□ -0.71
UBR4-205ENST00000417040 CCR5P51681 352 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 PNRC1Q12796 327 aaPredicted RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 IGFBP7Q16270 282 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 LRRC10Q5BKY1 277 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 SOSTQ9BQB4 213 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 SLC7A10Q9NS82 523 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 TNRC6CQ9HCJ0 1690 aaKnown RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 TMSB15BA0A087X1C1 80 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 SPTY2D1-AS1A0A0U1RR47 76 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 C1QL1O75973 258 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 ATP6V0CP27449 155 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 GZMMP51124 257 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 PDPNQ86YL7 162 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 ADAT3Q96EY9 351 aaPredicted RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 C2CD4DB7Z1M9 353 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 FAM157AC9JC47 383 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 ZNF141Q15928 474 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 MVB12AQ96EY5 273 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 RPP25Q9BUL9 199 aaKnown RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 M0QZK8 103 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 GGCTO75223 188 aaKnown RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 AGFG2O95081 481 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 GABRG2P18507 467 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 ZNF273Q14593 569 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 C5orf17Q8NAS9 161 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 CCL17Q92583 94 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 SCAND1P57086 179 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 FAM3BP58499 235 aaPredicted RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 TNXAQ16473 311 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 FAHD2BQ6P2I3 314 aaPredicted RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 WDR74Q6RFH5 385 aaPredicted RBP10.6□□□□□ -0.71
UBR4-205ENST00000417040 OR11G2Q8NGC1 345 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 FAHD2AQ96GK7 314 aa10.6□□□□□ -0.71
UBR4-205ENST00000417040 PRRG2O14669 202 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 SIAH2O43255 324 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 Q5BKY6 102 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 OR4C12Q96R67 309 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 IL36GQ9NZH8 169 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 PITPNC1Q9UKF7 332 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 K7ESF4 209 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 MT-CO3P00414 261 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 OTX1P32242 354 aaPredicted RBP10.59□□□□□ -0.71
UBR4-205ENST00000417040 PMELP40967 661 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 ZIC1Q15915 447 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 OVCH2Q7RTZ1 564 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 TMEM191AQ9H0A3 160 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 SLC52A3Q9NQ40 469 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 IGHV3OR15-7A0A075B7D8 119 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 VSIG8P0DPA2 414 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 MPLP40238 635 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 MMP16P51512 607 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 ZNF343Q6P1L6 599 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 WDR34Q96EX3 536 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 ALG14Q96F25 216 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 PPYP01298 95 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 IL11P20809 199 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 LDLRAD3Q86YD5 345 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 OR11H4Q8NGC9 324 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 ANGPTL4Q9BY76 406 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 NMBP08949 121 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 NMUP48645 174 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 TGIF1Q15583 401 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 ZNF660Q6AZW8 331 aaPredicted RBP10.59□□□□□ -0.71
UBR4-205ENST00000417040 SPINK14Q6IE38 97 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 NRIP2Q9BQI9 281 aa10.59□□□□□ -0.71
UBR4-205ENST00000417040 A0A1W2PPE3 182 aa10.58□□□□□ -0.72
UBR4-205ENST00000417040 MEOX1P50221 254 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms