RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 OR5T2Q8NGG2 359 aa16.06■□□□□ 0.16
USP39-202ENST00000409025 PIK3IP1Q96FE7 263 aa16.06■□□□□ 0.16
USP39-202ENST00000409025 TREM2Q9NZC2 230 aa16.06■□□□□ 0.16
USP39-202ENST00000409025 GLS2Q9UI32 602 aa16.06■□□□□ 0.16
USP39-202ENST00000409025 PTPRQQ9UMZ3 2332 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 LAMA5O15230 3695 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 TRAV14DV4A0A0A6YYC5 116 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 H7C1Q1 480 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 M0R233 179 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 SLC33A1O00400 549 aaPredicted RBP16.05■□□□□ 0.16
USP39-202ENST00000409025 DIRAS3O95661 229 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 IGHV3-13P01766 116 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 RBMXP38159 391 aaKnown RBP16.05■□□□□ 0.16
USP39-202ENST00000409025 PIGPP57054 158 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 RPS23P62266 143 aaKnown RBP16.05■□□□□ 0.16
USP39-202ENST00000409025 RELL2Q8NC24 303 aaPredicted RBP16.05■□□□□ 0.16
USP39-202ENST00000409025 HEXA-AS1Q9H8Q6 139 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 JKAMPQ9P055 326 aa16.05■□□□□ 0.16
USP39-202ENST00000409025 POM121CA8CG34 1229 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 PPYP01298 95 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 CCKARP32238 428 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 KLF3P57682 345 aaPredicted RBP16.04■□□□□ 0.16
USP39-202ENST00000409025 CYCSP99999 105 aaKnown RBP16.04■□□□□ 0.16
USP39-202ENST00000409025 OPCMLQ14982 345 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 MSMPQ1L6U9 139 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 SHEQ5VZ18 495 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 ZNF880Q6PDB4 577 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 LRP11Q86VZ4 500 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 OR2Z1Q8NG97 314 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 PPP1R1CQ8WVI7 109 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 TMEM165Q9HC07 324 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 UFSP2Q9NUQ7 469 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 C1orf123Q9NWV4 160 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 PRR13Q9NZ81 148 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 KCNIP3Q9Y2W7 256 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 ATP6V1G2-DDX39BF2Z307 99 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 BET1O15155 118 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 HAND1O96004 215 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 VHLLQ6RSH7 139 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 TEX261Q6UWH6 196 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 WDR82Q6UXN9 313 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 C20orf204Q6ZNR8 217 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 SLC7A5P1Q8MH63 180 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 METTL8Q9H825 291 aaKnown RBP16.04■□□□□ 0.16
USP39-202ENST00000409025 U3KQ87 197 aa16.04■□□□□ 0.16
USP39-202ENST00000409025 CD40P25942 277 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 C11orf87Q6NUJ2 197 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 C22orf34Q6ZV56 151 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 RND1Q92730 232 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 SYT3Q9BQG1 590 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 RSRP1Q9BUV0 290 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 NMES1Q9C002 83 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 RASL12Q9NYN1 266 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 OR14J1Q9UGF5 321 aa16.03■□□□□ 0.16
USP39-202ENST00000409025 hCG_1807616A0A1W2PRN6 198 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 ADAP1O75689 374 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 SLC25A4P12235 298 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 RPA2P15927 270 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 CD200P41217 278 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 HLA-DRB3P79483 266 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 KLRB1Q12918 225 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 LRRC37A5PQ49AS3 106 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 TMEM65Q6PI78 240 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 ACP7Q6ZNF0 438 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 MOB1BQ7L9L4 216 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 ZNF546Q86UE3 836 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 CCDC71LQ8N9Z2 235 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 OR4A4PQ8NGN8 299 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 TMEM171Q8WVE6 324 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 RTN4IP1Q8WWV3 396 aaPredicted RBP16.02■□□□□ 0.16
USP39-202ENST00000409025 VKORC1Q9BQB6 163 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 NAA60Q9H7X0 242 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 SLC2A9Q9NRM0 540 aa16.02■□□□□ 0.16
USP39-202ENST00000409025 BOD1L1Q8NFC6 3051 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 CEP295Q9C0D2 2601 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 WNT9BO14905 357 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 S100A11P31949 105 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 SELENOVP59797 346 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 HERPUD1Q15011 391 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 PHLDA2Q53GA4 152 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 TMEM108Q6UXF1 575 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 ZNF497Q6ZNH5 498 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 TMUB2Q71RG4 321 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 SSX8Q7RTT4 187 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 C5orf24Q7Z6I8 188 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 PLPPR1Q8TBJ4 325 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 MFFQ9GZY8 342 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 RDH8Q9NYR8 311 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 PCDHB10Q9UN67 800 aa16.02■□□□□ 0.15
USP39-202ENST00000409025 IGLV3-9A0A075B6K5 115 aa16.01■□□□□ 0.15
USP39-202ENST00000409025 MPC2O95563 127 aa16.01■□□□□ 0.15
USP39-202ENST00000409025 RCC1P18754 421 aaPredicted RBP16.01■□□□□ 0.15
USP39-202ENST00000409025 ZNF680Q8NEM1 530 aa16.01■□□□□ 0.15
USP39-202ENST00000409025 THAP6Q8TBB0 222 aa16.01■□□□□ 0.15
USP39-202ENST00000409025 DMXL2Q8TDJ6 3036 aa16■□□□□ 0.15
USP39-202ENST00000409025 IGKV1-6A0A0C4DH72 117 aa16■□□□□ 0.15
USP39-202ENST00000409025 ZSCAN5BA6NJL1 495 aa16■□□□□ 0.15
USP39-202ENST00000409025 LMO1P25800 156 aa16■□□□□ 0.15
USP39-202ENST00000409025 CASP6P55212 293 aa16■□□□□ 0.15
USP39-202ENST00000409025 SMIM21Q3B7S5 101 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms