RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 ANAPC1Q9H1A4 1944 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ARRDC5A6NEK1 342 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 PDZK1P1A8MUH7 402 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 TMX2-CTNND1H3BSU7 103 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 HMGN4O00479 90 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 FFAR1O14842 300 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 SLC31A1O15431 190 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ERI3O43414 337 aaKnown RBP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CDC40O60508 579 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 SERPINB7O75635 380 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 AQP8O94778 261 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 GABARAPO95166 117 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 GADD45GO95257 159 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 FARS2O95363 451 aaKnown RBP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 MOSP00540 346 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 BCHEP06276 602 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 SRMP19623 302 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CNR1P21554 472 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 HIST1H1TP22492 207 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CMPK1P30085 196 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CTRLP40313 264 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 SSR2P43308 183 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 MAP2K4P45985 399 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CYB561P49447 251 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CARD18P57730 90 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 SMIM11AP58511 58 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 SLAMF1Q13291 335 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 SPCS2Q15005 226 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ZNF726P1Q15940 193 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 GUCA2BQ16661 112 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ZNF829Q3KNS6 432 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 TNFAIP8L2Q6P589 184 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ZNF493Q6ZR52 646 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 LINC00299Q6ZSB3 139 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 TBC1D19Q8N5T2 526 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 GPR32P1Q8NGA4 272 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR4E2Q8NGC2 313 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 APH1BQ8WW43 257 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 GIMAP1Q8WWP7 306 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 RASSF5Q8WWW0 418 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 RAB8BQ92930 207 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CREB3L1Q96BA8 519 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 MS4A6EQ96DS6 147 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 BMFQ96LC9 184 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR2M4Q96R27 311 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 RSPO3Q9BXY4 272 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR51I1Q9H343 314 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 KIR3DX1Q9H7L2 352 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 NMNAT1Q9HAN9 279 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 BCL2L10Q9HD36 194 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ACOT13Q9NPJ3 140 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 FKBP14Q9NWM8 211 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ENOPH1Q9UHY7 261 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 CES1P1Q9UKY3 287 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 RHBDD3Q9Y3P4 386 aa3.29□□□□□ -1.88
HMGB3P18-201ENST00000406327 ZNF106Q9H2Y7 1883 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 DSPPQ9NZW4 1301 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 AGRNO00468 2067 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CLDN24A6NM45 220 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 KLLNB2CW77 178 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 C4orf51C9J302 202 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 FAAHO00519 579 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 SLC22A1O15245 554 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 MPZL2O60487 215 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 FADS2O95864 444 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 MBP02144 154 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 STATHP02808 62 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CDK1P06493 297 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CRYGCP07315 174 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 DCNP07585 359 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR12D1P0DN82 309 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CTRB1P17538 263 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CSNK2A2P19784 350 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 OMGP23515 440 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 PSMB9P28065 219 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 PEBP1P30086 187 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 MPIP34949 423 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 TGFBR2P37173 567 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 NMUP48645 174 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 IDH2P48735 452 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 NCBP2P52298 156 aaKnown RBP eCLIP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CRISP3P54108 245 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 PSMD4P55036 377 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 CDC42P60953 191 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 HERVK_113P61574 105 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 RPS15AP62244 130 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 BTN3A2P78410 334 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 HTR4Q13639 388 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 DGCR6Q14129 220 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 GNA13Q14344 377 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 PON3Q15166 354 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 PTGES3Q15185 160 aaKnown RBP3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 RNF212Q495C1 297 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 SLC48A1Q6P1K1 146 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 FAM92BQ6ZTR7 304 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 MBOAT2Q6ZWT7 520 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 AHSA2Q719I0 299 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 SPAG16Q8N0X2 631 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 TMEM104Q8NE00 496 aa3.28□□□□□ -1.88
HMGB3P18-201ENST00000406327 OR4D11Q8NGI4 311 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms