RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 COMMD1Q8N668 190 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 BOD1Q96IK1 185 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 SPOCK3Q9BQ16 436 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 NIPSNAP3BQ9BS92 247 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 CRIM1Q9NZV1 1036 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 TRIOBPQ9H2D6 2365 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 A0A087WZY1 265 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 A0A1W2PR80 420 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 OR5H1A6NKK0 313 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 SEC14L6B5MCN3 397 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 TERTO14746 1132 aaKnown RBP11.87□□□□□ -0.51
COL6A2-203ENST00000397763 IGLV3-1P01715 115 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 SCTP09683 121 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 GNRHRP30968 328 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 NKX2-1P43699 371 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-203ENST00000397763 DYNLT3P51808 116 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 RPS18P62269 152 aaKnown RBP11.87□□□□□ -0.51
COL6A2-203ENST00000397763 LSM6P62312 80 aaKnown RBP11.87□□□□□ -0.51
COL6A2-203ENST00000397763 KCNMB1Q16558 191 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 ZNF695Q8IW36 515 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 RNASE11Q8TAA1 199 aaKnown RBP11.87□□□□□ -0.51
COL6A2-203ENST00000397763 FRZBQ92765 325 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 MISP3Q96FF7 219 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 PACRGQ96M98 296 aaPredicted RBP11.87□□□□□ -0.51
COL6A2-203ENST00000397763 OR51B6Q9H340 312 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 HSF4Q9ULV5 492 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
COL6A2-203ENST00000397763 C3orf85A0A1B0GTC6 90 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 K7N7A8 449 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ALDH3B1P43353 468 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 CASP6P55212 293 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 SLC25A53Q5H9E4 307 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 TBC1D26Q86UD7 250 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 MAML2Q8IZL2 1156 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-203ENST00000397763 LURAP1Q96LR2 239 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ARV1Q9H2C2 271 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ZNF286AQ9HBT8 521 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 IGKV1D-13A0A0B4J2D9 117 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ZFP92A6NM28 416 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 PROB1E7EW31 1015 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 PPYP01298 95 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 PGA5P0DJD9 388 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 IGKV1-13P0DP09 117 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 FGF8P55075 233 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-203ENST00000397763 RAB11AP62491 216 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ZNF385CQ66K41 422 aaPredicted RBP11.86□□□□□ -0.51
COL6A2-203ENST00000397763 GALNT14Q96FL9 552 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 PISDQ9UG56 409 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 MPPED1O15442 326 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 RRP8O43159 456 aaKnown RBP11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ZIC3O60481 467 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 G0S2P27469 103 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 RPL23AP62750 156 aaKnown RBP11.86□□□□□ -0.51
COL6A2-203ENST00000397763 H3F3AP84243 136 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ZNF880Q6PDB4 577 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 SPSB3Q6PJ21 355 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 HIST3H2BBQ8N257 126 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 GAPTQ8N292 157 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 ATG101Q9BSB4 218 aa11.86□□□□□ -0.51
COL6A2-203ENST00000397763 STRAPQ9Y3F4 350 aaKnown RBP11.86□□□□□ -0.51
COL6A2-203ENST00000397763 A0A096LPE4 126 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 A0A1W2PPZ6 126 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 VAMP2P63027 116 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 TMEM267Q0VDI3 215 aaPredicted RBP11.85□□□□□ -0.51
COL6A2-203ENST00000397763 MALLQ13021 153 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 SLC25A24Q6NUK1 477 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 ZNF818PQ6ZRF7 136 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 TGIF2LXQ8IUE1 241 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 NECAP1Q8NC96 275 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 CCDC74BQ96LY2 380 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 GNG13Q9P2W3 67 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 COL5A1P20908 1838 aaPredicted RBP11.85□□□□□ -0.51
COL6A2-203ENST00000397763 SMCO3A2RU48 225 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 ETV2O00321 342 aaPredicted RBP11.85□□□□□ -0.51
COL6A2-203ENST00000397763 TRAPPC6AO75865 159 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 MMP9P14780 707 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 PRR18Q8N4B5 295 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 TMEM252Q8N6L7 170 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 ZNF611Q8N823 705 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 OR51H1Q8NH63 302 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 OR1F12Q8NHA8 337 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 OR14L1PQ8NHC6 308 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 ZNF488Q96MN9 340 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 SYT3Q9BQG1 590 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 CCL28Q9NRJ3 127 aa11.85□□□□□ -0.51
COL6A2-203ENST00000397763 PTRH2Q9Y3E5 179 aaKnown RBP11.85□□□□□ -0.51
COL6A2-203ENST00000397763 IGLV3-12A0A075B6K2 115 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 IGHV5-10-1A0A0J9YXX1 117 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 SLC31A2O15432 143 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 CXCL13O43927 109 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 CYTIPO60759 359 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 PSG4Q00888 419 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 REC114Q7Z4M0 266 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 RABEPKQ7Z6M1 372 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 C1QL4Q86Z23 238 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 FAM210BQ96KR6 192 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 WASF3Q9UPY6 502 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 DOCK11Q5JSL3 2073 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 LOC400499M0QZD8 3231 aa11.84□□□□□ -0.51
COL6A2-203ENST00000397763 CHST1O43916 411 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms