RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 WNT9BO14905 357 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 IGHV3-13P01766 116 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 AADACP22760 399 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 PAN3Q58A45 887 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 WDR82Q6UXN9 313 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 SLC7A5P1Q8MH63 180 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 OR2Z1Q8NG97 314 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 MOB3AQ96BX8 217 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 TMEM165Q9HC07 324 aa16.79■□□□□ 0.28
PDLIM5-205ENST00000380180 KIR2DS1A0A191URI9 304 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 C13orf42A0A1B0GVH6 325 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 C5orf51A6NDU8 294 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 ARPC5O15511 151 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 CD40P25942 277 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 SERPINF1P36955 418 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 KIR2DS4P43632 304 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 PIGPP57054 158 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 HOXA4Q00056 320 aaPredicted RBP16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 KIR2DS1Q14954 304 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 HERPUD1Q15011 391 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 SPIN3Q5JUX0 258 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 SGPP2Q8IWX5 399 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 OR5T2Q8NGG2 359 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 TMEM171Q8WVE6 324 aa16.78■□□□□ 0.28
PDLIM5-205ENST00000380180 TEX13DA0A0J9YY54 714 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 CRYM-AS1A6NIL9 109 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 C1QTNF9BB2RNN3 333 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 L7N2F9 121 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 BET1O15155 118 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 ADAP1O75689 374 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 PPYP01298 95 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 IFNA2P01563 188 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 C1QTNF9P0C862 333 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 RCC1P18754 421 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 UCP3P55916 312 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 KLF3P57682 345 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 FGL1Q08830 312 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 OR8H1Q8NGG4 311 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 USB1Q9BQ65 265 aaKnown RBP16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 SYT3Q9BQG1 590 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 OR14J1Q9UGF5 321 aa16.77■□□□□ 0.28
PDLIM5-205ENST00000380180 SPTA1P02549 2419 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 SNAPC5O75971 98 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 HERV-K104P61576 105 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 ABCA11PQ4W5N1 156 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 ZNF880Q6PDB4 577 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 FIP1L1Q6UN15 594 aaKnown RBP16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 GSG1LQ6UXU4 331 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 PLPPR1Q8TBJ4 325 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 PPP1R1CQ8WVI7 109 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 RND1Q92730 232 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 RAB18Q9NP72 206 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 TREM2Q9NZC2 230 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 COMMD9Q9P000 198 aa16.77■□□□□ 0.27
PDLIM5-205ENST00000380180 POLEQ07864 2286 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 IGKV1-6A0A0C4DH72 117 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 MPC2O95563 127 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 HAND1O96004 215 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 TK1P04183 234 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 RBMXP38159 391 aaKnown RBP16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 MDH2P40926 338 aaKnown RBP16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 CEBPDP49716 269 aaPredicted RBP16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 MZT1Q08AG7 82 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 NDUFA5Q16718 116 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 LRRC37A5PQ49AS3 106 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 ACP7Q6ZNF0 438 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 CACNA1DQ01668 2161 aa16.76■□□□□ 0.27
PDLIM5-205ENST00000380180 IGLV3-9A0A075B6K5 115 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 hCG_1807616A0A1W2PRN6 198 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 ZSCAN5BA6NJL1 495 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 KLRB1Q12918 225 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 OPCMLQ14982 345 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 TEX261Q6UWH6 196 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 SLC38A6Q8IZM9 456 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 PIK3IP1Q96FE7 263 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 DMRTA2Q96SC8 542 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 VKORC1Q9BQB6 163 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 RASL12Q9NYN1 266 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 U3KQ87 197 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 CTXN2P0C2S0 81 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 PHLDA2Q53GA4 152 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 SHEQ5VZ18 495 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 ZNF497Q6ZNH5 498 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 ZNF767PQ75MW2 155 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 RTN4IP1Q8WWV3 396 aaPredicted RBP16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 RSRP1Q9BUV0 290 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 METTL8Q9H825 291 aaKnown RBP16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 SLC2A9Q9NRM0 540 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 C1orf123Q9NWV4 160 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 CHD8Q9HCK8 2581 aa16.75■□□□□ 0.27
PDLIM5-205ENST00000380180 ZZEF1O43149 2961 aa16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 TRGV8A0A0C4DH27 118 aa16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 MPTX1A8MV57 137 aa16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 DIRAS3O95661 229 aa16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 LMO1P25800 156 aa16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 CD200P41217 278 aa16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 RPS23P62266 143 aaKnown RBP16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 ATXN7L3Q14CW9 347 aaPredicted RBP16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 C11orf87Q6NUJ2 197 aa16.74■□□□□ 0.27
PDLIM5-205ENST00000380180 TMEM108Q6UXF1 575 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms