RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TMEM14DPA8MWL7 114 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 TMPRSS3P57727 454 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 FGF12P61328 243 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 TMEM182Q6ZP80 229 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-202ENST00000377797 SLC2A9Q9NRM0 540 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 VSIG4Q9Y279 399 aa12.55□□□□□ -0.4
TCOF1-202ENST00000377797 A0A1B0GTI1 187 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 LGALS8O00214 317 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 ADAM20O43506 726 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 SYNGR1O43759 233 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 FCGR3AP08637 254 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 Q6ZT83 130 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 SVBPQ8N300 66 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 OR2D2Q9H210 308 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 CUL9Q8IWT3 2517 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 TMEM210A6NLX4 147 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 SYNGR3O43761 229 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 ELLP55199 621 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-202ENST00000377797 Q3ZCU0 254 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 LYG1Q8N1E2 194 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 TAAR6Q96RI8 345 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 ALX4Q9H161 411 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-202ENST00000377797 PIGMQ9H3S5 423 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 PSENENQ9NZ42 101 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 PURGQ9UJV8 347 aaKnown RBP12.54□□□□□ -0.4
TCOF1-202ENST00000377797 DNAH12Q6ZR08 3092 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 TP53BP1Q12888 1972 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-202ENST00000377797 PKDREJQ9NTG1 2253 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 OBSL1O75147 1896 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 SNRNP70P08621 437 aaKnown RBP12.54□□□□□ -0.4
TCOF1-202ENST00000377797 CTSSP25774 331 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 TAS2R30P59541 319 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 SCNM1Q9BWG6 230 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 LOC390937A0A1W2PQ73 354 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 ZNF716A6NP11 495 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 SNAPINO95295 136 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 VSIG10L2P0DP72 767 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 GABRA6Q16445 453 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 ABLIM2Q6H8Q1 611 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 OR5D13Q8NGL4 314 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 PRR7Q8TB68 274 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 SAP30LQ9HAJ7 183 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 CCL28Q9NRJ3 127 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 RASL12Q9NYN1 266 aa12.54□□□□□ -0.4
TCOF1-202ENST00000377797 ZNF629Q9UEG4 869 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-202ENST00000377797 ALDH3B1P43353 468 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 GNG10P50151 68 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 MITD1Q8WV92 249 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 AQP3Q92482 292 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 SLC25A32Q9H2D1 315 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 OR6C3Q9NZP0 311 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 CA11O75493 328 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 CHATP28329 748 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 VAX1Q5SQQ9 334 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 FAM122CQ6P4D5 195 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 ERGIC1Q969X5 290 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 GNPNAT1Q96EK6 184 aaPredicted RBP12.53□□□□□ -0.4
TCOF1-202ENST00000377797 STRAPQ9Y3F4 350 aaKnown RBP12.53□□□□□ -0.4
TCOF1-202ENST00000377797 CLEC18AA5D8T8 446 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 SHOXO15266 292 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 VWA1Q6PCB0 445 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 TRAT1Q6PIZ9 186 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 GAPTQ8N292 157 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 CLEC18CQ8NCF0 446 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 HPSE2Q8WWQ2 592 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 USB1Q9BQ65 265 aaKnown RBP12.53□□□□□ -0.4
TCOF1-202ENST00000377797 TMPRSS2O15393 492 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 ONECUT2O95948 504 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 M6PRP20645 277 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 PMELP40967 661 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 LPAR6P43657 344 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 RPS16P62249 146 aaKnown RBP12.53□□□□□ -0.4
TCOF1-202ENST00000377797 CST9LP1Q5W188 147 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 Q6ZRG5 221 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 TBC1D26Q86UD7 250 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 RNF7Q9UBF6 113 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 OSGIN2Q9Y236 505 aa12.53□□□□□ -0.4
TCOF1-202ENST00000377797 PUS1Q9Y606 427 aaKnown RBP eCLIP12.53□□□□□ -0.4
TCOF1-202ENST00000377797 H2AFB1P0C5Y9 115 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 ZNF826PQ6ZT77 177 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 C1QL2Q7Z5L3 287 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 CHAC2Q8WUX2 184 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 WDYHV1Q96HA8 205 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 COMMD5Q9GZQ3 224 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 CA10Q9NS85 328 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 LRRK1Q38SD2 2015 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 HMSDA8MTL9 139 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 FCGR3BO75015 233 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 CRHP06850 196 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 NAT2P11245 290 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 ACKR3P25106 362 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.4
TCOF1-202ENST00000377797 HLA-DRB3P79483 266 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 PRSS54Q6PEW0 395 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-202ENST00000377797 ABHD17AQ96GS6 310 aa12.52□□□□□ -0.41
TCOF1-202ENST00000377797 CIB3Q96Q77 187 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-202ENST00000377797 NARFLQ9H6Q4 476 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms