RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 TSPAN7P41732 249 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 FOXO1Q12778 655 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 CT55Q8WUE5 264 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 IP6K3Q96PC2 410 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 HS3ST6Q96QI5 342 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 C20orf24Q9BUV8 137 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 CRIM1Q9NZV1 1036 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 FBXO7Q9Y3I1 522 aa21.73■■□□□ 1.07
C9orf40-201ENST00000376854 A0A1B0GV50 99 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 UMAD1C9J7I0 102 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 SERPINA7P05543 415 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 SRYQ05066 204 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 SPINK14Q6IE38 97 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 ZNF818PQ6ZRF7 136 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 SPIN2AQ99865 258 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 SPIN2BQ9BPZ2 258 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 LOXL2Q9Y4K0 774 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 IGSF23A1L1A6 192 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 C1orf196B1AJZ1 125 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 K7N7A8 449 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 NAPSAO96009 420 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 PPP1CCP36873 323 aaKnown RBP21.72■■□□□ 1.07
C9orf40-201ENST00000376854 FGF12P61328 243 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 SSPNQ14714 243 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 SELENOHQ8IZQ5 122 aaKnown RBP21.72■■□□□ 1.07
C9orf40-201ENST00000376854 GAPTQ8N292 157 aa21.72■■□□□ 1.07
C9orf40-201ENST00000376854 CELSR3Q9NYQ7 3312 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 C5orf49A4QMS7 147 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 RND3P61587 244 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 ZNF266Q14584 549 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 SRSF7Q16629 238 aaKnown RBP eCLIP21.71■■□□□ 1.07
C9orf40-201ENST00000376854 SLC35B3Q9H1N7 401 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 HSPB6O14558 160 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 SSSCA1O60232 199 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 HLA-HP01893 362 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 MT-ND4LP03901 98 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 C6orf15Q6UXA7 325 aaPredicted RBP21.71■■□□□ 1.07
C9orf40-201ENST00000376854 MRPL21Q7Z2W9 205 aaKnown RBP21.71■■□□□ 1.07
C9orf40-201ENST00000376854 LFNGQ8NES3 379 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 GPHA2Q96T91 129 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 KCNJ16Q9NPI9 418 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 IL36RNQ9UBH0 155 aa21.71■■□□□ 1.07
C9orf40-201ENST00000376854 BOKQ9UMX3 212 aaPredicted RBP21.71■■□□□ 1.07
C9orf40-201ENST00000376854 IGKV3D-15A0A087WSY6 115 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 ADAM20O43506 726 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 PITX3O75364 302 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 OMGP23515 440 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 ZDHHC23Q8IYP9 409 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 SAXO1Q8IYX7 474 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 ISOC2Q96AB3 205 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 LINC00470Q9BZP3 86 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 MAGT1Q9H0U3 335 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 PLEKHF2Q9H8W4 249 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 LRFN1Q9P244 771 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 COL27A1Q8IZC6 1860 aaPredicted RBP21.7■■□□□ 1.06
C9orf40-201ENST00000376854 TECTAO75443 2155 aa21.7■■□□□ 1.06
C9orf40-201ENST00000376854 DAOP14920 347 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 MEOX2P50222 304 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 SNRPEP62304 92 aaKnown RBP21.69■■□□□ 1.06
C9orf40-201ENST00000376854 HERPUD1Q15011 391 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 CEACAM21Q3KPI0 293 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 RNF212Q495C1 297 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 CXorf66Q5JRM2 361 aaPredicted RBP21.69■■□□□ 1.06
C9orf40-201ENST00000376854 OR2G3Q8NGZ4 309 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 CD300LFQ8TDQ1 290 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 NEK7Q8TDX7 302 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 PSMF1Q92530 271 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 TUBA4BQ9H853 241 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 RFNGQ9Y644 331 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 IGKV1D-13A0A0B4J2D9 117 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 SLC22A20A6NK97 555 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 IGKV1-13P0DP09 117 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 TSC22D1Q15714 1073 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 LYRM2Q9NU23 88 aaPredicted RBP21.69■■□□□ 1.06
C9orf40-201ENST00000376854 MTCH1Q9NZJ7 389 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 GPR179Q6PRD1 2367 aa21.69■■□□□ 1.06
C9orf40-201ENST00000376854 ACP1P24666 158 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 ATP6V0CP27449 155 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 VAMP2P63027 116 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 SLC25A31Q9H0C2 315 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 ZNF724A8MTY0 619 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 ZNF732B4DXR9 585 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 HSD17B6O14756 317 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 OR13C7P0DN81 318 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 TGIF1Q15583 401 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 KRBOX4Q5JUW0 171 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 TUSC5Q8IXB3 177 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 TMEM252Q8N6L7 170 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 LILRB1Q8NHL6 650 aaPredicted RBP21.68■■□□□ 1.06
C9orf40-201ENST00000376854 CALHM2Q9HA72 323 aa21.68■■□□□ 1.06
C9orf40-201ENST00000376854 PRSS44E7EML9 344 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 TRAPPC2LH3BP13 241 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 FOXG1P55316 489 aaPredicted RBP21.67■■□□□ 1.06
C9orf40-201ENST00000376854 TMEM171Q8WVE6 324 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 THOC3Q96J01 351 aaKnown RBP21.67■■□□□ 1.06
C9orf40-201ENST00000376854 PRRG4Q9BZD6 226 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 KIR2DS1A0A191URI9 304 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 A0A1W2PPH5 198 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 A6NLC8 198 aa21.67■■□□□ 1.06
C9orf40-201ENST00000376854 LINC01387J3KSC0 135 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms