RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 H0YHG0 523 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 J3QR06 171 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 DEGS1O15121 323 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 IGHV3-7P01780 117 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 OCM2P0CE71 109 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 OCMP0CE72 109 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-202ENST00000374426 SLC6A1P30531 599 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 TMED1Q13445 227 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 DCTN2Q13561 401 aaKnown RBP10.88□□□□□ -0.67
CXCL12-202ENST00000374426 SAXO1Q8IYX7 474 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 OR51T1Q8NGJ9 327 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 OR13A1Q8NGR1 328 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 LEAP2Q969E1 77 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 NEK6Q9HC98 313 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 ZFP57Q9NU63 452 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 CALYQ9NYX4 217 aa10.88□□□□□ -0.67
CXCL12-202ENST00000374426 AMMECR1Q9Y4X0 333 aaPredicted RBP10.88□□□□□ -0.67
CXCL12-202ENST00000374426 SERPINE3A8MV23 424 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 HSPB6O14558 160 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 FGF16O43320 207 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 IGHG2P01859 326 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 TMEM11P17152 192 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 GLP1RP43220 463 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 ZP1P60852 638 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 DGCR2P98153 550 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 BNIP1Q12981 228 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 MADCAM1Q13477 382 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 HES1Q14469 280 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 HNF4GQ14541 408 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 UNQ9370/PRO34162Q6UXP9 181 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 AMIGO2Q86SJ2 522 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 OR13C3Q8NGS6 347 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 TFAP2CQ92754 450 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 RFKQ969G6 155 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 HRASLS5Q96KN8 279 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 DUX3Q96PT4 197 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 GABARAPL3Q9BY60 117 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 LINC00574Q9H8X3 128 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 KIF25Q9UIL4 384 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 PSG11Q9UQ72 335 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 MYRFQ9Y2G1 1151 aa10.87□□□□□ -0.67
CXCL12-202ENST00000374426 HUWE1Q7Z6Z7 4374 aaKnown RBP10.86□□□□□ -0.67
CXCL12-202ENST00000374426 DYNC2H1Q8NCM8 4307 aaKnown RBP10.86□□□□□ -0.67
CXCL12-202ENST00000374426 MEIKINA0A087WXM9 373 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 LINC01548A6NM66 108 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 OR4C45A6NMZ5 311 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 H0YJX3 145 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 J3QRE1 110 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 SLC16A6O15403 523 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 IL1AP01583 271 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 FASP25445 335 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 CCR9P51686 369 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 KCTD20Q7Z5Y7 419 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 SLC35E3Q7Z769 313 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 ZNF695Q8IW36 515 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 STPG2Q8N412 459 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 COMMD1Q8N668 190 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 ZNF565Q8N9K5 539 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 RAX2Q96IS3 184 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 OSBPL10Q9BXB5 764 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 RIBC2Q9H4K1 309 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 ZCCHC4Q9H5U6 513 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 IDI2-AS1Q9NZ38 188 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 ZMAT5Q9UDW3 170 aaKnown RBP10.86□□□□□ -0.67
CXCL12-202ENST00000374426 RYR2Q92736 4967 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 DNAH7Q8WXX0 4024 aa10.86□□□□□ -0.67
CXCL12-202ENST00000374426 TRAV24A0A0B4J272 114 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 NPIPB11E5RHQ5 1161 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 IGKV1D-33P01593 117 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 IGKV1-33P01594 117 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 HTR1AP08908 422 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 NHLRC4P0CG21 123 aaPredicted RBP10.85□□□□□ -0.67
CXCL12-202ENST00000374426 TMEM225BP0DP42 221 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 DBTP11182 482 aaKnown RBP10.85□□□□□ -0.67
CXCL12-202ENST00000374426 GNG10P50151 68 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 RAB7AP51149 207 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 SLC35B1P78383 322 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 KISS1Q15726 138 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 LTC4SQ16873 150 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 PAN3Q58A45 887 aaKnown RBP10.85□□□□□ -0.67
CXCL12-202ENST00000374426 OR8H3Q8N146 312 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 RFESDQ8TAC1 157 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 HAVCR2Q8TDQ0 301 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 PELI1Q96FA3 418 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 NCOR1P1Q9H4R4 102 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 LSM4Q9Y4Z0 139 aaKnown RBP10.85□□□□□ -0.67
CXCL12-202ENST00000374426 AP4S1Q9Y587 144 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 U3KQK5 164 aa10.85□□□□□ -0.67
CXCL12-202ENST00000374426 DAPL1A0PJW8 107 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 CCL24O00175 119 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 RAMP3O60896 148 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 HCKP08631 526 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 C21orf33P30042 268 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-202ENST00000374426 SSTR5P35346 364 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 MTNR1BP49286 362 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 LUMP51884 338 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-202ENST00000374426 PAX5Q02548 391 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 EBI3Q14213 229 aa10.84□□□□□ -0.67
CXCL12-202ENST00000374426 NKAPLQ5M9Q1 402 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms