RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 BAP18Q8IXM2 172 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF283Q8N7M2 679 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 MAPK1IP1LQ8NDC0 245 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 SLC30A7Q8NEW0 376 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 OR52N4Q8NGI2 321 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 ST8SIA4Q92187 359 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 FAM168AQ92567 244 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 SPTSSAQ969W0 71 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 PPP1R14AQ96A00 147 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF837Q96EG3 531 aaPredicted RBP8.86□□□□□ -0.99
COL5A1-202ENST00000371820 C2orf50Q96LR7 162 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 TMEM59Q9BXS4 323 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 SELENOIQ9C0D9 397 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 RAB1BQ9H0U4 201 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 C14orf166Q9Y224 244 aaKnown RBP8.86□□□□□ -0.99
COL5A1-202ENST00000371820 VSIG4Q9Y279 399 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 KCNIP3Q9Y2W7 256 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 RHBDD3Q9Y3P4 386 aa8.86□□□□□ -0.99
COL5A1-202ENST00000371820 CADP27708 2225 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 IGHV2OR16-5A0A0B4J2B6 119 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 NDUFS8O00217 210 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 FGF16O43320 207 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 DHHO43323 396 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 CDC14BO60729 498 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 NDUFS7O75251 213 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 MPZL1O95297 269 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 IFNA21P01568 189 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 HLA-HP01893 362 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 QDPRP09417 244 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 OR4A8P0C604 315 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 VAMP1P23763 118 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 CPT2P23786 658 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 SLC6A9P48067 706 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 PPOXP50336 477 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 PDLIM4P50479 330 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 RAB1AP62820 205 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 PPP1R1AQ13522 171 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 SMCO1Q147U7 214 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 ADIPOQQ15848 244 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 SWI5Q1ZZU3 235 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 C10orf128Q5T292 105 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 COMMD2Q86X83 199 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 LINC00346Q8IVM7 164 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 SPAG16Q8N0X2 631 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 SVBPQ8N300 66 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 OR52H1Q8NGJ2 320 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 OR51A2Q8NGJ7 313 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 ARL11Q969Q4 196 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 MRPS24Q96EL2 167 aaKnown RBP8.85□□□□□ -0.99
COL5A1-202ENST00000371820 PGAM5Q96HS1 289 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 LINC00052Q96N35 136 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 TECTBQ96PL2 329 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 TM2D1Q9BX74 207 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 LPAR5Q9H1C0 372 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 TMEM38BQ9NVV0 291 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 C1orf123Q9NWV4 160 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 ABCA1O95477 2261 aa8.85□□□□□ -0.99
COL5A1-202ENST00000371820 RTTNQ86VV8 2226 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 MXRA5Q9NR99 2828 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 TSPAN4O14817 238 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 F12P00748 615 aaPredicted RBP8.84□□□□□ -0.99
COL5A1-202ENST00000371820 CELA3BP08861 270 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF14P17017 642 aaPredicted RBP8.84□□□□□ -0.99
COL5A1-202ENST00000371820 AKR1C4P17516 323 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 ATF4P18848 351 aaPredicted RBP8.84□□□□□ -0.99
COL5A1-202ENST00000371820 MSR1P21757 451 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 HRH1P35367 487 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 GLRXP35754 106 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 PMELP40967 661 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 PLP2Q04941 152 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 BTN1A1Q13410 526 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 UNC119Q13432 240 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 ZNF273Q14593 569 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 HMGN3Q15651 99 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 ELP2Q6IA86 826 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 FOXL2NBQ6ZUU3 175 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 SLC16A14Q7RTX9 510 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 SLC38A6Q8IZM9 456 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 COMMD1Q8N668 190 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 OR51T1Q8NGJ9 327 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 OR13C9Q8NGT0 318 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 OR51E1Q8TCB6 317 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 NEU4Q8WWR8 484 aaPredicted RBP8.84□□□□□ -0.99
COL5A1-202ENST00000371820 SPSB1Q96BD6 273 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 ADAT3Q96EY9 351 aaPredicted RBP8.84□□□□□ -0.99
COL5A1-202ENST00000371820 CXorf58Q96LI9 332 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 REPIN1Q9BWE0 567 aaKnown RBP8.84□□□□□ -0.99
COL5A1-202ENST00000371820 PLK3Q9H4B4 646 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 METTL8Q9H825 291 aaKnown RBP8.84□□□□□ -0.99
COL5A1-202ENST00000371820 DYNLRB1Q9NP97 96 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 TMEM100Q9NV29 134 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 PRELID1Q9Y255 219 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 KCNK7Q9Y2U2 307 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 V9GYS6 101 aa8.84□□□□□ -0.99
COL5A1-202ENST00000371820 IGHV4-30-2A0A087WSY4 118 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 ZNF503-AS2A6NEH8 195 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 FAM25EA8MYX2 175 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 TOR1AO14656 332 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 CD5LO43866 347 aa8.83□□□□□ -1
COL5A1-202ENST00000371820 CRTAPO75718 401 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms