RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HAAOP46952 286 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 KLF3P57682 345 aaPredicted RBP12.46□□□□□ -0.41
CXCL12-201ENST00000343575 RPS23P62266 143 aaKnown RBP12.46□□□□□ -0.41
CXCL12-201ENST00000343575 SRSF1Q07955 248 aaKnown RBP eCLIP12.46□□□□□ -0.41
CXCL12-201ENST00000343575 LY6G6FQ5SQ64 297 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 ELP2Q6IA86 826 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 ZNF611Q8N823 705 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 VRK1Q99986 396 aaPredicted RBP12.46□□□□□ -0.41
CXCL12-201ENST00000343575 GAL3ST1Q99999 423 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 ADAT1Q9BUB4 502 aaKnown RBP12.46□□□□□ -0.41
CXCL12-201ENST00000343575 LPAR5Q9H1C0 372 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 COA4Q9NYJ1 87 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 PLEKHA6Q9Y2H5 1048 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 DOPEY1Q5JWR5 2465 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 FAM208BQ5VWN6 2430 aa12.46□□□□□ -0.41
CXCL12-201ENST00000343575 TRAV18A0A075B6X5 111 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 OR5B21A6NL26 309 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 C3orf80F5H4A9 247 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 F8VVB4 439 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 F8VWA3 439 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 RAB27BO00194 218 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 FGF16O43320 207 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 CDC14BO60729 498 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 RAB3DO95716 219 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 HEXAP06865 529 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 SFTPBP07988 381 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 PTHLHP12272 177 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 GNG3P63215 75 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 MEF2DQ14814 521 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 DAZAP2Q15038 168 aaPredicted RBP12.46□□□□□ -0.42
CXCL12-201ENST00000343575 SLC25A26Q70HW3 274 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 RTN4RL2Q86UN3 420 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 STOML3Q8TAV4 291 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 ARL11Q969Q4 196 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 HIST1H2AAQ96QV6 131 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 NICN1Q9BSH3 213 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 PDCD10Q9BUL8 212 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF471Q9BX82 626 aaPredicted RBP12.46□□□□□ -0.42
CXCL12-201ENST00000343575 MTCH1Q9NZJ7 389 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 GHRLQ9UBU3 117 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 RAB22AQ9UL26 194 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 ATP23Q9Y6H3 246 aa12.46□□□□□ -0.42
CXCL12-201ENST00000343575 IGHV3-64DA0A0J9YX35 117 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 RNF222A6NCQ9 220 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 SYNGR1O43759 233 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 RHBDL1O75783 438 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 CD3DP04234 171 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 MPZP25189 248 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 CD34P28906 385 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 RBMXP38159 391 aaKnown RBP12.45□□□□□ -0.42
CXCL12-201ENST00000343575 NPBWR2P48146 333 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 AKR1D1P51857 326 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 LUMP51884 338 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF154Q13106 437 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 OR8G1Q15617 311 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 SPRNQ5BIV9 151 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 BEX5Q5H9J7 111 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 FAHD2BQ6P2I3 314 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-201ENST00000343575 C11orf53Q8IXP5 236 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 INO80EQ8NBZ0 244 aaPredicted RBP12.45□□□□□ -0.42
CXCL12-201ENST00000343575 Q8NFD4 153 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 OR8S1Q8NH09 359 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 OR51F2Q8NH61 342 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 KCNG3Q8TAE7 436 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 FAHD2AQ96GK7 314 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 TMEM204Q9BSN7 226 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 ATG5Q9H1Y0 275 aa12.45□□□□□ -0.42
CXCL12-201ENST00000343575 MPIG6BO95866 241 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 CD74P04233 296 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 OR4A8P0C604 315 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 SERPINA2P20848 420 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 MEOX2P50222 304 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 OR13G1Q8NGZ3 307 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 THAP6Q8TBB0 222 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 CPNE2Q96FN4 548 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-201ENST00000343575 RTL8AQ9BWD3 113 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 SLC2A8Q9NY64 477 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 IL36GQ9NZH8 169 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 TAAR3PQ9P1P4 343 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 CHD3Q12873 2000 aaKnown RBP12.44□□□□□ -0.42
CXCL12-201ENST00000343575 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 SPTAN1Q13813 2472 aaKnown RBP12.44□□□□□ -0.42
CXCL12-201ENST00000343575 FOXI3A8MTJ6 420 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-201ENST00000343575 CRTAPO75718 401 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-201ENST00000343575 CD3EP07766 207 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 PNLIPRP3Q17RR3 467 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 IL34Q6ZMJ4 242 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF573Q86YE8 665 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 BATF2Q8N1L9 274 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 FAM89BQ8N5H3 189 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 ZSCAN4Q8NAM6 433 aaPredicted RBP12.44□□□□□ -0.42
CXCL12-201ENST00000343575 SCCPDHQ8NBX0 429 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 ACBD4Q8NC06 268 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 OR4D10Q8NGI6 311 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 AQP3Q92482 292 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 PRRT1Q99946 306 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 MICU1Q9BPX6 476 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 TMEM59Q9BXS4 323 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 METTL9Q9H1A3 318 aa12.44□□□□□ -0.42
CXCL12-201ENST00000343575 ZNF581Q9P0T4 197 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms