RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MUC1P15941 1255 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 SERF2P84101 59 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 SLC25A35Q3KQZ1 300 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 PTPMT1Q8WUK0 201 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 SLC25A19Q9HC21 320 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 DYNLRB1Q9NP97 96 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 GPR84Q9NQS5 396 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 LY75O60449 1722 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 TRAV8-4A0A0B4J246 113 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 TMEM272A0A1B0GTI8 110 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 ZNF785A8K8V0 405 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 RABIFP47224 123 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 RPS15P62841 145 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 BCDIN3DQ7Z5W3 292 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 ZNF48Q96MX3 618 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 OR2V2Q96R30 315 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 MRPL18Q9H0U6 180 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 ZNF391Q9UJN7 358 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 AHDC1Q5TGY3 1603 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 COL24A1Q17RW2 1714 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 FOLR3P41439 243 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 TCTN1Q2MV58 587 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 PRTGQ2VWP7 1150 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 JMJD6Q6NYC1 403 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 FAHD1Q6P587 224 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 H1FNTQ75WM6 255 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 PAAF1Q9BRP4 392 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 AICDAQ9GZX7 198 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 TRAV8-7A0A075B6U6 113 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 A0A0A6YYC8 382 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 I3L1I5 382 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 HRO43593 1189 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 ICAM2P13598 275 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 KIR2DL1P43626 348 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 KIR2DL2P43627 348 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 MNX1P50219 401 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 C17orf67Q0P5P2 114 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 TAS1R1Q7RTX1 841 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 PTX4Q96A99 478 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 MRGPRX4Q96LA9 322 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 NTMQ9P121 344 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 CTXND1A0A1B0GTU2 59 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 GHRHP01286 108 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 CFHP08603 1231 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 MMP9P14780 707 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 SELPP16109 830 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 CLDN17P56750 224 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 TMEM176BQ3YBM2 270 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 TSPAN32Q96QS1 320 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 BEX4Q9NWD9 120 aaPredicted RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 ZMIZ1Q9ULJ6 1067 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 MMACHCQ9Y4U1 282 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 USP3Q9Y6I4 520 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 WNT10BO00744 389 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 MPZL1O95297 269 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 ADRA2AP08913 450 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 CKS2P33552 79 aa5.51□□□□□ -1.53
VCAN-203ENST00000343200 POLR2IP36954 125 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 DNAJB12Q9NXW2 375 aaKnown RBP5.51□□□□□ -1.53
VCAN-203ENST00000343200 IGHV4-34P06331 123 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 PPP1CAP62136 330 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 NPY5RQ15761 445 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 ZNF841Q6ZN19 808 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 RTN4RL1Q86UN2 441 aaPredicted RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 ZDHHC23Q8IYP9 409 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 OR1F12Q8NHA8 337 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 MRAPQ8TCY5 172 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TNFRSF13CQ96RJ3 184 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 P2RX4Q99571 388 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 C1QTNF6Q9BXI9 259 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SERINC4A6NH21 518 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TMPRSS3P57727 454 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SEC11AP67812 179 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TMEM108Q6UXF1 575 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SLC25A42Q86VD7 318 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 MUC15Q8N387 334 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 UBE2FQ969M7 185 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 PIGTQ969N2 578 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 ENTPD2Q9Y5L3 495 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 M0QZ24 198 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 HSPB1P04792 205 aaKnown RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 GALNSP34059 522 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 NR0B2Q15466 257 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SYPL1Q16563 259 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 GUCA2BQ16661 112 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 ZNF562Q6V9R5 426 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 LIAT1Q6ZQX7 453 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TMEM230Q96A57 120 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 C5orf30Q96GV9 206 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TBL2Q9Y4P3 447 aaKnown RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 LANCL1O43813 399 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 F12P00748 615 aaPredicted RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 GPX2P18283 190 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 PPP1CCP36873 323 aaKnown RBP5.5□□□□□ -1.53
VCAN-203ENST00000343200 HERPUD1Q15011 391 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 TXNDC8Q6A555 127 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 OR11H7Q8NGC8 314 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 SIGLEC11Q96RL6 698 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 PARLQ9H300 379 aa5.5□□□□□ -1.53
VCAN-203ENST00000343200 COL5A1P20908 1838 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms