RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FGF23Q9GZV9 251 aaPredicted RBP10.88□□□□□ -0.67
DDX39A-202ENST00000324340 UQCC1Q9NVA1 299 aa10.88□□□□□ -0.67
DDX39A-202ENST00000324340 MRPS28Q9Y2Q9 187 aaKnown RBP10.88□□□□□ -0.67
DDX39A-202ENST00000324340 HCFC1P51610 2035 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 IGLV3-9A0A075B6K5 115 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 OR5H14A6NHG9 310 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 TMEM14DPA8MWL7 114 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ZG16O60844 167 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 IGHV3-13P01766 116 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 TPT1P13693 172 aaKnown RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 RAB6AP20340 208 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 GRNP28799 593 aaKnown RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 GCH1P30793 250 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 OR3A4PP47883 348 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 RAB5CP51148 216 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 LUMP51884 338 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ATP1B3P54709 279 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 MTCP1P56278 107 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ACTBP60709 375 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ACTG1P63261 375 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 BSPH1Q075Z2 132 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ZNF124Q15973 351 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 MSMPQ1L6U9 139 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ALKBH6Q3KRA9 238 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 NCMAPQ5T1S8 102 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 DCAF12L2Q5VW00 463 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 RAB12Q6IQ22 244 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 FAHD2BQ6P2I3 314 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 TMEM88Q6PEY1 159 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ASCL4Q6XD76 172 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 C1QL4Q86Z23 238 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 BHLHE23Q8NDY6 225 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 OR8G5Q8NG78 346 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 SYNPRQ8TBG9 265 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 GTF3AQ92664 365 aaKnown RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 FAHD2AQ96GK7 314 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 GPER1Q99527 375 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 VRK1Q99986 396 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ZNF471Q9BX82 626 aaPredicted RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 KLK11Q9UBX7 282 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 NOP16Q9Y3C1 178 aaKnown RBP10.87□□□□□ -0.67
DDX39A-202ENST00000324340 ESPL1Q14674 2120 aa10.87□□□□□ -0.67
DDX39A-202ENST00000324340 TRBV6-7A0A0A0MS04 114 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 FAM230AA0A1W2PPH8 454 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 OR5B21A6NL26 309 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 VSIG8P0DPA2 414 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 MPZP25189 248 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 MAS1LP35410 378 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 FABP6P51161 128 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 RAB2AP61019 212 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 PLA2G7Q13093 441 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 LY6G6FQ5SQ64 297 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 EIF5AL1Q6IS14 154 aaKnown RBP10.86□□□□□ -0.67
DDX39A-202ENST00000324340 GLIPR1L1Q6UWM5 242 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 SLC16A13Q7RTY0 426 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 TMEM229BQ8NBD8 167 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 INO80EQ8NBZ0 244 aaPredicted RBP10.86□□□□□ -0.67
DDX39A-202ENST00000324340 LINC01560Q8TB33 94 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 NRIP2Q9BQI9 281 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 TINAGL1Q9GZM7 467 aaPredicted RBP10.86□□□□□ -0.67
DDX39A-202ENST00000324340 ZNF442Q9H7R0 627 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 RCC2Q9P258 522 aaKnown RBP10.86□□□□□ -0.67
DDX39A-202ENST00000324340 KPTNQ9Y664 436 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 PRR14LQ5THK1 2151 aa10.86□□□□□ -0.67
DDX39A-202ENST00000324340 IGSF10Q6WRI0 2623 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 RP1L1Q8IWN7 2480 aaPredicted RBP10.85□□□□□ -0.67
DDX39A-202ENST00000324340 TEX13DA0A0J9YY54 714 aaPredicted RBP10.85□□□□□ -0.67
DDX39A-202ENST00000324340 MFNGO00587 321 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 CD74P04233 296 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 RLN1P04808 185 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 CA6P23280 308 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 CDK2P24941 298 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 CAV2P51636 162 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 EFNB2P52799 333 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 DEFA6Q01524 100 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 RELQ04864 619 aaPredicted RBP10.85□□□□□ -0.67
DDX39A-202ENST00000324340 UNC119Q13432 240 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 C2orf68Q2NKX9 166 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 C1QL2Q7Z5L3 287 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 BIVMQ86UB2 503 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 TMEM200AQ86VY9 491 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 COMMD1Q8N668 190 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 ZSCAN4Q8NAM6 433 aaPredicted RBP10.85□□□□□ -0.67
DDX39A-202ENST00000324340 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 KCNG3Q8TAE7 436 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 EDARADDQ8WWZ3 215 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 HIST1H2AAQ96QV6 131 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 TLNRD1Q9H1K6 362 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 KCNK15Q9H427 330 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 IL36GQ9NZH8 169 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 RAB22AQ9UL26 194 aa10.85□□□□□ -0.67
DDX39A-202ENST00000324340 A0A0A6YYH2 397 aa10.84□□□□□ -0.67
DDX39A-202ENST00000324340 A6NJ64 397 aa10.84□□□□□ -0.67
DDX39A-202ENST00000324340 AP4M1O00189 453 aa10.84□□□□□ -0.67
DDX39A-202ENST00000324340 CTAG2O75638 210 aa10.84□□□□□ -0.67
DDX39A-202ENST00000324340 NPBWR1P48145 328 aa10.84□□□□□ -0.67
DDX39A-202ENST00000324340 GPM6AP51674 278 aa10.84□□□□□ -0.67
DDX39A-202ENST00000324340 KLF3P57682 345 aaPredicted RBP10.84□□□□□ -0.67
DDX39A-202ENST00000324340 TAS2R19P59542 299 aa10.84□□□□□ -0.67
DDX39A-202ENST00000324340 GNG3P63215 75 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms