RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 GPM6AP51674 278 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 RAC1P63000 192 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 PDZD11Q5EBL8 140 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 EXTL1Q92935 676 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 UBE2CO00762 179 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 CA11O75493 328 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 DYNLT3P51808 116 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 TRIM61Q5EBN2 209 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 FOXL2NBQ6ZUU3 175 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 OR4D5Q8NGN0 318 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 OR2H1Q9GZK4 316 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 CCL28Q9NRJ3 127 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 POMT1Q9Y6A1 747 aa17.09■□□□□ 0.33
CRLF3-201ENST00000324238 K7N7A8 449 aa17.08■□□□□ 0.33
CRLF3-201ENST00000324238 HAAOP46952 286 aa17.08■□□□□ 0.33
CRLF3-201ENST00000324238 RBM11P57052 281 aaKnown RBP17.08■□□□□ 0.33
CRLF3-201ENST00000324238 SPINK14Q6IE38 97 aa17.08■□□□□ 0.33
CRLF3-201ENST00000324238 CDPF1Q6NVV7 123 aa17.08■□□□□ 0.33
CRLF3-201ENST00000324238 LHFPL2Q6ZUX7 228 aa17.08■□□□□ 0.33
CRLF3-201ENST00000324238 OR10D3Q8NH80 312 aa17.08■□□□□ 0.33
CRLF3-201ENST00000324238 CLDN23Q96B33 292 aa17.08■□□□□ 0.33
CRLF3-201ENST00000324238 CLDN15P56746 228 aa17.08■□□□□ 0.32
CRLF3-201ENST00000324238 RND3P61587 244 aa17.08■□□□□ 0.32
CRLF3-201ENST00000324238 GPR157Q5UAW9 335 aa17.08■□□□□ 0.32
CRLF3-201ENST00000324238 BCL2L14Q9BZR8 327 aa17.08■□□□□ 0.32
CRLF3-201ENST00000324238 hCG_38984A0A1B0GV85 526 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 TERTO14746 1132 aaKnown RBP17.07■□□□□ 0.32
CRLF3-201ENST00000324238 FUT3P21217 361 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 PMS2CLQ68D20 193 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 VASH2Q86V25 355 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 OR56B2PQ8NGI1 322 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 FGF23Q9GZV9 251 aaPredicted RBP17.07■□□□□ 0.32
CRLF3-201ENST00000324238 EP300Q09472 2414 aaPredicted RBP17.07■□□□□ 0.32
CRLF3-201ENST00000324238 HLA-HP01893 362 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 FAM209BQ5JX69 171 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 TMEM252Q8N6L7 170 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 OR1J1Q8NGS3 322 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 Q0VFX4 171 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 IL13RA2Q14627 380 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 CYB561D1Q8N8Q1 229 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 OR51H1Q8NH63 302 aa17.07■□□□□ 0.32
CRLF3-201ENST00000324238 RP1L1Q8IWN7 2480 aaPredicted RBP17.06■□□□□ 0.32
CRLF3-201ENST00000324238 OR6C6A6NF89 314 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 ZNF716A6NP11 495 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 CHST1O43916 411 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 CBR3O75828 277 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 P04436 131 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 FOLR3P41439 243 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 VAMP2P63027 116 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 SPSB3Q6PJ21 355 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 ODF3L1Q8IXM7 274 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 PRR18Q8N4B5 295 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 A0A087WZY1 265 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 PINLYPA6NC86 204 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 RBFOX3A6NFN3 312 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 H3BQ15 152 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 HS3ST1O14792 307 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 B3GALT5-AS1P59052 145 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 RAC3P60763 192 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 HERPUD1Q15011 391 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 DPPA2Q7Z7J5 298 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 GGNQ86UU5 652 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 TMEM105Q8N8V8 129 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 RAB39BQ96DA2 213 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 PBDC1Q9BVG4 233 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 HES7Q9BYE0 225 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 TMEM222Q9H0R3 208 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 DEPPQ9NTK1 212 aa17.06■□□□□ 0.32
CRLF3-201ENST00000324238 TRDCB7Z8K6 153 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 FGF5P12034 268 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 TAGLN2P37802 199 aaKnown RBP17.05■□□□□ 0.32
CRLF3-201ENST00000324238 FUT6P51993 359 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 NDUFA6P56556 154 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 HMGN3Q15651 99 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 OR2Y1Q8NGV0 311 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 BDP1A6H8Y1 2624 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 GDF1P27539 372 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 SELENOHQ8IZQ5 122 aaKnown RBP17.05■□□□□ 0.32
CRLF3-201ENST00000324238 EDARADDQ8WWZ3 215 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 RDH5Q92781 318 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 TMED3Q9Y3Q3 217 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 PRR14LQ5THK1 2151 aa17.05■□□□□ 0.32
CRLF3-201ENST00000324238 A0A0G2JRQ6 117 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 CST2P09228 141 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 CXCL1P09341 107 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 TMEM267Q0VDI3 215 aaPredicted RBP17.04■□□□□ 0.32
CRLF3-201ENST00000324238 KIAA0141Q14154 515 aaPredicted RBP17.04■□□□□ 0.32
CRLF3-201ENST00000324238 C20orf204Q6ZNR8 217 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 LRTM2Q8N967 370 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 CCDC71LQ8N9Z2 235 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 C10orf35Q96D05 121 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 NGFP01138 241 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 CELA3AP09093 270 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 MDKP21741 143 aaPredicted RBP17.04■□□□□ 0.32
CRLF3-201ENST00000324238 UCP2P55851 309 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 IL11RAQ14626 422 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 RNF212Q495C1 297 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 Q6ZSR3 168 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 IL1F10Q8WWZ1 152 aa17.04■□□□□ 0.32
CRLF3-201ENST00000324238 GPR35Q9HC97 309 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms