RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 C17orf107Q6ZR85 190 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 OR4S1Q8NGB4 309 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 OR4D10Q8NGI6 311 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 DYRK2Q92630 601 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 NRGNQ92686 78 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 SNAPC3Q92966 411 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 SDSLQ96GA7 329 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 CMSS1Q9BQ75 279 aaKnown RBP15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 TMEM165Q9HC07 324 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 IFT46Q9NQC8 304 aa15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 ZNF701Q9NV72 531 aaPredicted RBP15.8■□□□□ 0.12
PDLIM3-202ENST00000284770 CRYBG3Q68DQ2 2970 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 TMEM82A0PJX8 343 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 ZNF737O75373 536 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 GIFP27352 417 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 TMEM33P57088 247 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 KRTAP10-9P60411 292 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 MRPS15P82914 257 aaKnown RBP15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 KCNJ8Q15842 424 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 SHEQ5VZ18 495 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 HIST2H2BCQ6DN03 193 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 ZNF788Q6ZQV5 615 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 ZNF561Q8N587 486 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 HDHD3Q9BSH5 251 aaPredicted RBP15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 SHARPINQ9H0F6 387 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 DNTTIP1Q9H147 329 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 PPA2Q9H2U2 334 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 ZNF665Q9H7R5 613 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 MAB21L2Q9Y586 359 aa15.79■□□□□ 0.12
PDLIM3-202ENST00000284770 USF3Q68DE3 2245 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 ZNF736B4DX44 427 aaPredicted RBP15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 TNFRSF13BO14836 293 aaPredicted RBP15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 IGHV4-39P01824 125 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 HLA-DMAP28067 261 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 FAUP35544 74 aaKnown RBP15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 MDH2P40926 338 aaKnown RBP15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 CCR6P51684 374 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 OR52W1Q6IF63 320 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 PLET1Q6UQ28 207 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 ASCC1Q8N9N2 400 aaKnown RBP15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 UPRTQ96BW1 309 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 SNX22Q96L94 193 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 CCL13Q99616 98 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 DPAGT1Q9H3H5 408 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 MYOZ1Q9NP98 299 aaPredicted RBP15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 ETAA1Q9NY74 926 aa15.78■□□□□ 0.12
PDLIM3-202ENST00000284770 NDUFA2O43678 99 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 IGHV2-70P01814 119 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 PAX1P15863 534 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 OR3A1P47881 315 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 KCNJ3P48549 501 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 HOGA1Q86XE5 327 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 ZNRF1Q8ND25 227 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 RAB1CQ92928 201 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 TIMD4Q96H15 378 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 GAFA1Q96PS6 74 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 TMEM246Q9BRR3 403 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 MARVELD1Q9BSK0 173 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 CHST6Q9GZX3 395 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 C12orf4Q9NQ89 552 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 AKAP6Q13023 2319 aa15.77■□□□□ 0.12
PDLIM3-202ENST00000284770 K7N7A8 449 aa15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 PPIHO43447 177 aaKnown RBP15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 NAPSAO96009 420 aa15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 PPP1R35Q8TAP8 253 aa15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 TINAGL1Q9GZM7 467 aaPredicted RBP15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 RIMS4Q9H426 269 aaPredicted RBP15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 MCUBQ9NWR8 336 aa15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 COPZ2Q9P299 210 aa15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 ZNF230Q9UIE0 474 aaPredicted RBP15.77■□□□□ 0.11
PDLIM3-202ENST00000284770 NKX6-3A6NJ46 265 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 M0QYG6 137 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 SIGLEC5O15389 551 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 TMPRSS2O15393 492 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 RAB3DO95716 219 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 TCRBP04435 133 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 CSN2P05814 226 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 DTYMKP23919 212 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 IL13RA1P78552 427 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 ATXN7L3Q14CW9 347 aaPredicted RBP15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 GRK1Q15835 563 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 SLC36A1Q7Z2H8 476 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 MUC20Q8N307 709 aaPredicted RBP15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 PLPPR1Q8TBJ4 325 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 MED30Q96HR3 178 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 BARX1Q9HBU1 254 aaPredicted RBP15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 KAAG1Q9UBP8 84 aa15.76■□□□□ 0.11
PDLIM3-202ENST00000284770 TK1P04183 234 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 ZNF735P0CB33 412 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 TBPP20226 339 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 PAX5Q02548 391 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 CARTPTQ16568 116 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 AVPI1Q5T686 147 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 ZNF497Q6ZNH5 498 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 Q6ZPA2 131 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 GAPTQ8N292 157 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 FAM216BQ8N7L0 139 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 OR5D13Q8NGL4 314 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 OR56B4Q8NH76 319 aa15.75■□□□□ 0.11
PDLIM3-202ENST00000284770 CREB3L1Q96BA8 519 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms