RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 RPS18P62269 152 aaKnown RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 RPL23AP62750 156 aaKnown RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 CCL7P80098 99 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 DPPA2Q7Z7J5 298 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 YRDCQ86U90 279 aaKnown RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 ZNF610Q8N9Z0 462 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 GTF3AQ92664 365 aaKnown RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 C14orf144Q96I85 54 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 PLEKHF2Q9H8W4 249 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 OCIAD1Q9NX40 245 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 GAR1Q9NY12 217 aaKnown RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 CHST1O43916 411 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 SCAF4O95104 1147 aaKnown RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 CCNOP22674 350 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 EIF3IQ13347 325 aaKnown RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 LHFPL2Q6ZUX7 228 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 ZNF611Q8N823 705 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 CPNE4Q96A23 557 aaPredicted RBP15.48■□□□□ 0.07
TRAF4-201ENST00000262395 ADAMTS20P59510 1910 aa15.48■□□□□ 0.07
TRAF4-201ENST00000262395 TERTO14746 1132 aaKnown RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 BCAT2O15382 392 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BKO60814 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HLA-HP01893 362 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BJP06899 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BOP23527 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BBP33778 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BDP58876 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BCP62807 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HNF4GQ14541 408 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST2H2BEQ16778 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 STX12Q86Y82 276 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 SELENOHQ8IZQ5 122 aaKnown RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BHQ93079 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BNQ99877 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HIST1H2BMQ99879 126 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 GNG13Q9P2W3 67 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 PITX3O75364 302 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 SOD3P08294 240 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 NDUFB7P17568 137 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 RBM11P57052 281 aaKnown RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 PSG4Q00888 419 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 DAZAP2Q15038 168 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 RAB35Q15286 201 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 AKR1C8PQ5T2L2 129 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 C1QL4Q86Z23 238 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 ZNF100Q8IYN0 542 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 NEK7Q8TDX7 302 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 C10orf35Q96D05 121 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 C11orf1Q9H5F2 150 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 CALHM2Q9HA72 323 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 CCL28Q9NRJ3 127 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 HSPA12AO43301 675 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 MRPS34P82930 218 aaKnown RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 C9orf135Q5VTT2 229 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 SLC23A3Q6PIS1 610 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 CMTM1Q8IZ96 169 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 EXTL1Q92935 676 aa15.47■□□□□ 0.07
TRAF4-201ENST00000262395 LYRM2Q9NU23 88 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-201ENST00000262395 ZFP92A6NM28 416 aa15.46■□□□□ 0.07
TRAF4-201ENST00000262395 CCL2P13500 99 aa15.46■□□□□ 0.07
TRAF4-201ENST00000262395 FUT3P21217 361 aa15.46■□□□□ 0.07
TRAF4-201ENST00000262395 TMEM267Q0VDI3 215 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-201ENST00000262395 FOXL2NBQ6ZUU3 175 aa15.46■□□□□ 0.07
TRAF4-201ENST00000262395 MYPOPQ86VE0 399 aaPredicted RBP15.46■□□□□ 0.07
TRAF4-201ENST00000262395 THNSL2Q86YJ6 484 aa15.46■□□□□ 0.07
TRAF4-201ENST00000262395 NIPSNAP3BQ9BS92 247 aa15.46■□□□□ 0.07
TRAF4-201ENST00000262395 PROK2Q9HC23 129 aa15.46■□□□□ 0.07
TRAF4-201ENST00000262395 IGHV5-10-1A0A0J9YXX1 117 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 LIFP15018 202 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 RAB11AP62491 216 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 MPV17LQ2QL34 196 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 SLC25A24Q6NUK1 477 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 Q6ZSR3 168 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 IL22RA1Q8N6P7 574 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 CADM4Q8NFZ8 388 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 PRO1933Q9H354 126 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 KIAA1456Q9P272 454 aa15.46■□□□□ 0.06
TRAF4-201ENST00000262395 DIDO1Q9BTC0 2240 aaKnown RBP15.46■□□□□ 0.06
TRAF4-201ENST00000262395 FGF8P55075 233 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-201ENST00000262395 ZNF385CQ66K41 422 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-201ENST00000262395 TVP23CQ96ET8 276 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 CCDC74BQ96LY2 380 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 CRIM1Q9NZV1 1036 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 CDS2O95674 445 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 MAS1LP35410 378 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 RAB30Q15771 203 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 UNQ6494/PRO21346Q6UXR6 183 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 GFOD1Q9NXC2 390 aa15.45■□□□□ 0.06
TRAF4-201ENST00000262395 C19orf25Q9UFG5 118 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-201ENST00000262395 FAM186AA6NE01 2351 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 A0A0G2JMM0 328 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 A0A1W2PPB8 328 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 A0A1W2PRS3 328 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 KIR3DP1A8MWS1 328 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 BCL3P20749 454 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 UCP3P55916 312 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 PCOLCEQ15113 449 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 CEACAM16Q2WEN9 425 aa15.44■□□□□ 0.06
TRAF4-201ENST00000262395 LCN15Q6UWW0 184 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms