RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 NXF2Q9GZY0 626 aaKnown RBP11.66□□□□□ -0.54
VPS25-201ENST00000253794 PPA2Q9H2U2 334 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.54
VPS25-201ENST00000253794 PEX16Q9Y5Y5 336 aa11.66□□□□□ -0.54
VPS25-201ENST00000253794 POM121CA8CG34 1229 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 MCRIP1C9JLW8 97 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 SOCS1O15524 211 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 ENSAO43768 121 aaKnown RBP11.65□□□□□ -0.54
VPS25-201ENST00000253794 APOA1P02647 267 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 NDUFB7P17568 137 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 BLVRBP30043 206 aaPredicted RBP11.65□□□□□ -0.54
VPS25-201ENST00000253794 VEGFCP49767 419 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 LCN2P80188 198 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 ARL6IP1Q15041 203 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 PLAC9Q5JTB6 97 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 ATAD3CQ5T2N8 411 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 RSBN1Q5VWQ0 802 aaPredicted RBP11.65□□□□□ -0.54
VPS25-201ENST00000253794 SLC35E4Q6ICL7 350 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 MZT2AQ6P582 158 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 ZNF497Q6ZNH5 498 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 GDPD3Q7L5L3 318 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 GLCCI1Q86VQ1 547 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 KIR3DL3Q8N743 410 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 OR10R2Q8NGX6 335 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 PLPPR1Q8TBJ4 325 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 CORO2AQ92828 525 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 NEDD4LQ96PU5 975 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 CHST6Q9GZX3 395 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 INSIG2Q9Y5U4 225 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 A3GALT2U3KPV4 340 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 CSPG4Q6UVK1 2322 aa11.65□□□□□ -0.54
VPS25-201ENST00000253794 ABCA1O95477 2261 aa11.65□□□□□ -0.55
VPS25-201ENST00000253794 F8P00451 2351 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 J3QLI3 93 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 MFNGO00587 321 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 PPIAL4GP0DN37 164 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 ZNF16P17020 682 aaPredicted RBP11.64□□□□□ -0.55
VPS25-201ENST00000253794 RPL31P62899 125 aaKnown RBP11.64□□□□□ -0.55
VPS25-201ENST00000253794 PAX8Q06710 450 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 CR1LQ2VPA4 569 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 MOGAT2Q3SYC2 334 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 C1orf122Q6ZSJ8 110 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 TCF23Q7RTU1 214 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 C6orf201Q7Z4U5 140 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 BPIFB2Q8N4F0 458 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 SAMD12Q8N8I0 201 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 SULT4A1Q9BR01 284 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 PECRQ9BY49 303 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 MMP26Q9NRE1 261 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 C19orf12Q9NSK7 152 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 HIF1ANQ9NWT6 349 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 LINC00312Q9Y6C7 94 aa11.64□□□□□ -0.55
VPS25-201ENST00000253794 TLN2Q9Y4G6 2542 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 TRBV6-6A0A0A6YYG2 114 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 A0A0G2JMP0 313 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 A0A0X1KG70 313 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 hADV38S2A0JD32 116 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 ODAMA1E959 279 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 SERPINE3A8MV23 424 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 NAPSAO96009 420 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 TGFAP01135 160 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 RBP4P02753 201 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 HIST1H1DP16402 221 aaKnown RBP11.63□□□□□ -0.55
VPS25-201ENST00000253794 AESQ08117 197 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 ATXN7L3Q14CW9 347 aaPredicted RBP11.63□□□□□ -0.55
VPS25-201ENST00000253794 KRBOX4Q5JUW0 171 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 Q6ZTK2 550 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 CMTM4Q8IZR5 234 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 OR4M2Q8NGB6 313 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 H1FXQ92522 213 aaKnown RBP11.63□□□□□ -0.55
VPS25-201ENST00000253794 RAB3CQ96E17 227 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 ARHGAP5-AS1Q96IT6 56 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 ATG5Q9H1Y0 275 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 LINC00574Q9H8X3 128 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 LPAR2Q9HBW0 351 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 PLEKHJ1Q9NW61 149 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 TMEM160Q9NX00 188 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 ETAA1Q9NY74 926 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 OR6C3Q9NZP0 311 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 COMMD3Q9UBI1 195 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 KCNK7Q9Y2U2 307 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 UBE2J1Q9Y385 318 aaPredicted RBP11.63□□□□□ -0.55
VPS25-201ENST00000253794 KPTNQ9Y664 436 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 DOCK11Q5JSL3 2073 aa11.63□□□□□ -0.55
VPS25-201ENST00000253794 SVEP1Q4LDE5 3571 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 A0A1W2PPH5 198 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 TMEM30CPA0ZSE6 113 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 M0R1W7 72 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 HSPB6O14558 160 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 XRCC3O43542 346 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 TPPPO94811 219 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 MT-ND4P03905 459 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 GSTP1P09211 210 aaKnown RBP11.62□□□□□ -0.55
VPS25-201ENST00000253794 CGB3P0DN86 165 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 CGB7P0DN87 165 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 GLIPR1P48060 266 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 DLX6P56179 175 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 EDDM3BP56851 147 aa11.62□□□□□ -0.55
VPS25-201ENST00000253794 EDDM3AQ14507 147 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms