RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	ZPR1	P53303	486 aa	Known RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	CSI1	Q04368	295 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	MCM21	Q06675	368 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	FAP7	Q12055	197 aa	Predicted RBP	4.09	□□□□□ -1.75
SPT23	YKL020C	YGR161W-C	Q3E744	92 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	YBL113C	Q7M4S9	792 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	APC1	P53886	1748 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	POM152	P39685	1337 aa		4.09	□□□□□ -1.75
SPT23	YKL020C	ENO1	P00924	437 aa	Known RBP	4.09	□□□□□ -1.76
SPT23	YKL020C	STE3	P06783	470 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	DPB2	P24482	689 aa	Predicted RBP	4.09	□□□□□ -1.76
SPT23	YKL020C	DPH2	P32461	534 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	GLC3	P32775	704 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	PPQ1	P32945	549 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	YKL050C	P35736	922 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	RCN1	P36054	211 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	MAL33	P38157	468 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	KAP104	P38217	918 aa	Known RBP	4.09	□□□□□ -1.76
SPT23	YKL020C	MCX1	P38323	520 aa	Predicted RBP	4.09	□□□□□ -1.76
SPT23	YKL020C	YHR131C	P38835	850 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	PCL7	P40186	285 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	NEO1	P40527	1151 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	ISM1	P48526	1002 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	VMA10	P48836	114 aa	Known RBP	4.09	□□□□□ -1.76
SPT23	YKL020C	SIW14	P53965	281 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	UFD2	P54860	961 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	SPC19	Q03954	165 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	SHE9	Q04172	456 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	DIS3	Q08162	1001 aa	Known RBP	4.09	□□□□□ -1.76
SPT23	YKL020C	DSE3	Q08729	430 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	RSA1	Q08932	381 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	DCS2	Q12123	353 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	BBP1	Q12365	385 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	ADF1	Q2V2Q1	113 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	MPD2	Q99316	277 aa		4.09	□□□□□ -1.76
SPT23	YKL020C	FUR4	P05316	633 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
SPT23	YKL020C	SEC2	P17065	759 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	PRP6	P19735	899 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	CNA1	P23287	553 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	PTP1	P25044	335 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	SPB1	P25582	841 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	VMA6	P32366	345 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	SRB4	P32569	687 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	YKL023W	P36103	277 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	TYS1	P36421	394 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	KEL1	P38853	1164 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	YEN1	P40028	759 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	EFM4	P40516	257 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	TED1	P40533	473 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	ARC35	P53731	342 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	TAF9	Q05027	157 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	YLR287C	Q05881	355 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	YCS4	Q06156	1176 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	VHS3	Q08438	674 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	MSC6	Q08818	692 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	ELG1	Q12050	791 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	DAS2	Q12084	232 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	RSF2	P46974	1380 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	ARG4	P04076	463 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	RPS19A	P07280	144 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	RPS19B	P07281	144 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	LPD1	P09624	499 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	TIF1	P10081	395 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	PUT4	P15380	627 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	ADY2	P25613	283 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	TFB1	P32776	642 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	TYE7	P33122	291 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	CHK1	P38147	527 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	SMF2	P38778	549 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	UBP6	P43593	499 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	YJR054W	P47114	497 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	MRPL50	P53724	139 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	YNL146W	P53906	100 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	ATP25	Q03153	612 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	USA1	Q03714	838 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	SPO20	Q04359	397 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	IVY1	Q04934	453 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	YLR031W	Q07978	186 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	TAF10	Q12030	206 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	GET4	Q12125	312 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	GYP5	Q12344	894 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	ARP6	Q12509	438 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	SIR3	P06701	978 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	DCD1	P06773	312 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	PYC1	P11154	1178 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	REC107	P21651	314 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	SIN4	P32259	974 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	PYC2	P32327	1180 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	MRP4	P32902	394 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	PTC3	P34221	468 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	WHI3	P34761	661 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	PEX32	P38292	413 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	VMA22	P38784	181 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	PIK1	P39104	1066 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	MKT1	P40850	830 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	SPC105	P53148	917 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	BUL2	Q03758	920 aa	Known RBP	4.08	□□□□□ -1.76
SPT23	YKL020C	YDR179W-A	Q03983	463 aa		4.08	□□□□□ -1.76
SPT23	YKL020C	ARP10	Q04549	284 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 67 ms