RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 DAB2P98082 770 aa9.51□□□□□ -0.89
RTTN-217ENST00000640393 VN1R5Q7Z5H4 357 aa9.51□□□□□ -0.89
RTTN-217ENST00000640393 VTI1BQ9UEU0 232 aa9.51□□□□□ -0.89
RTTN-217ENST00000640393 A0A0A0MRY4 1105 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 SOX1O00570 391 aaPredicted RBP9.5□□□□□ -0.89
RTTN-217ENST00000640393 SORBS3O60504 671 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 USP17L7P0C7H9 530 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 IKBKEQ14164 716 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 CACTIN-AS1Q8N1I8 211 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 RBM47A0AV96 593 aaKnown RBP9.5□□□□□ -0.89
RTTN-217ENST00000640393 GIPC1O14908 333 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 RBM25P49756 843 aaKnown RBP9.5□□□□□ -0.89
RTTN-217ENST00000640393 RAC1P63000 192 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 PCDH1Q08174 1060 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 GRIK4Q16099 956 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 FRMD6Q96NE9 622 aa9.5□□□□□ -0.89
RTTN-217ENST00000640393 SPDYE3A6NKU9 549 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 H3BRJ5 948 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 FSCN2O14926 492 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 FBXO24O75426 580 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 SETDB1Q15047 1291 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 ZNF423Q2M1K9 1284 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 PRRT3Q5FWE3 981 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 PRPF40BQ6NWY9 871 aaKnown RBP9.49□□□□□ -0.89
RTTN-217ENST00000640393 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 KLHDC7BQ96G42 594 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 CLEC4MQ9H2X3 399 aaPredicted RBP9.49□□□□□ -0.89
RTTN-217ENST00000640393 FAM8A1Q9UBU6 413 aa9.49□□□□□ -0.89
RTTN-217ENST00000640393 DDX3YO15523 660 aaKnown RBP9.48□□□□□ -0.89
RTTN-217ENST00000640393 DEAF1O75398 565 aaPredicted RBP9.48□□□□□ -0.89
RTTN-217ENST00000640393 ESRRAP11474 423 aaPredicted RBP9.48□□□□□ -0.89
RTTN-217ENST00000640393 COL8A1P27658 744 aa9.48□□□□□ -0.89
RTTN-217ENST00000640393 GSTT1P30711 240 aa9.48□□□□□ -0.89
RTTN-217ENST00000640393 ARL4DP49703 201 aa9.48□□□□□ -0.89
RTTN-217ENST00000640393 GSTM4Q03013 218 aa9.48□□□□□ -0.89
RTTN-217ENST00000640393 GALNT11Q8NCW6 608 aa9.48□□□□□ -0.89
RTTN-217ENST00000640393 ZNF576Q9H609 170 aa9.48□□□□□ -0.89
RTTN-217ENST00000640393 NOP53Q9NZM5 478 aaKnown RBP9.48□□□□□ -0.89
RTTN-217ENST00000640393 GPN3Q9UHW5 284 aaPredicted RBP9.48□□□□□ -0.89
RTTN-217ENST00000640393 ITPKAP23677 461 aa9.47□□□□□ -0.89
RTTN-217ENST00000640393 TPTE2Q6XPS3 522 aa9.47□□□□□ -0.89
RTTN-217ENST00000640393 SRCIN1Q9C0H9 1055 aa9.47□□□□□ -0.89
RTTN-217ENST00000640393 BCL11AQ9H165 835 aa9.47□□□□□ -0.89
RTTN-217ENST00000640393 SEC31BQ9NQW1 1179 aa9.47□□□□□ -0.89
RTTN-217ENST00000640393 NLRP12P59046 1061 aa9.46□□□□□ -0.9
RTTN-217ENST00000640393 FAAP100Q0VG06 881 aa9.46□□□□□ -0.9
RTTN-217ENST00000640393 FMR1NBQ8N0W7 255 aaPredicted RBP9.46□□□□□ -0.9
RTTN-217ENST00000640393 TTF2Q9UNY4 1162 aaKnown RBP9.46□□□□□ -0.9
RTTN-217ENST00000640393 UNCXA6NJT0 531 aa9.45□□□□□ -0.9
RTTN-217ENST00000640393 C19orf57Q0VDD7 668 aa9.45□□□□□ -0.9
RTTN-217ENST00000640393 MEI1Q5TIA1 1274 aa9.45□□□□□ -0.9
RTTN-217ENST00000640393 SHISA2Q6UWI4 295 aa9.45□□□□□ -0.9
RTTN-217ENST00000640393 FBXO11Q86XK2 927 aa9.45□□□□□ -0.9
RTTN-217ENST00000640393 C3orf58Q8NDZ4 430 aa9.45□□□□□ -0.9
RTTN-217ENST00000640393 XRCC5P13010 732 aaKnown RBP9.44□□□□□ -0.9
RTTN-217ENST00000640393 PIP4K2BP78356 416 aa9.44□□□□□ -0.9
RTTN-217ENST00000640393 ILDR2Q71H61 639 aa9.44□□□□□ -0.9
RTTN-217ENST00000640393 MRRFQ96E11 262 aaKnown RBP9.44□□□□□ -0.9
RTTN-217ENST00000640393 KCNK4Q9NYG8 393 aa9.44□□□□□ -0.9
RTTN-217ENST00000640393 CTSHP09668 335 aa9.43□□□□□ -0.9
RTTN-217ENST00000640393 CD68P34810 354 aaPredicted RBP9.43□□□□□ -0.9
RTTN-217ENST00000640393 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
RTTN-217ENST00000640393 TSNAXIP1Q2TAA8 658 aa9.42□□□□□ -0.9
RTTN-217ENST00000640393 DTWD1Q8N5C7 304 aa9.42□□□□□ -0.9
RTTN-217ENST00000640393 USP26Q9BXU7 913 aa9.42□□□□□ -0.9
RTTN-217ENST00000640393 ZC3H12CQ9C0D7 883 aaKnown RBP9.42□□□□□ -0.9
RTTN-217ENST00000640393 ZFYVE1Q9HBF4 777 aa9.42□□□□□ -0.9
RTTN-217ENST00000640393 RNF225M0QZC1 329 aaPredicted RBP9.41□□□□□ -0.9
RTTN-217ENST00000640393 SUZ12Q15022 739 aaKnown RBP9.41□□□□□ -0.9
RTTN-217ENST00000640393 FOXD4L6Q3SYB3 417 aaPredicted RBP9.41□□□□□ -0.9
RTTN-217ENST00000640393 FOXD4L3Q6VB84 417 aaPredicted RBP9.41□□□□□ -0.9
RTTN-217ENST00000640393 KLHL23Q8NBE8 558 aa9.41□□□□□ -0.9
RTTN-217ENST00000640393 TMEM87AQ8NBN3 555 aa9.41□□□□□ -0.9
RTTN-217ENST00000640393 USP21Q9UK80 565 aa9.41□□□□□ -0.9
RTTN-217ENST00000640393 APBA3O96018 575 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 ELNP15502 786 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 MAP3K11Q16584 847 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 MAP4K3Q8IVH8 894 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 OSGEPQ9NPF4 335 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 TMEM39AQ9NV64 488 aa9.4□□□□□ -0.9
RTTN-217ENST00000640393 DLL1O00548 723 aa9.39□□□□□ -0.91
RTTN-217ENST00000640393 B3GALT4O96024 378 aa9.39□□□□□ -0.91
RTTN-217ENST00000640393 PPP2R3AQ06190 1150 aa9.39□□□□□ -0.91
RTTN-217ENST00000640393 TAF1CQ15572 869 aaPredicted RBP9.39□□□□□ -0.91
RTTN-217ENST00000640393 CCDC85BQ15834 202 aaPredicted RBP9.39□□□□□ -0.91
RTTN-217ENST00000640393 DUOXA2Q1HG44 320 aa9.39□□□□□ -0.91
RTTN-217ENST00000640393 RPS26P11Q5JNZ5 115 aaPredicted RBP9.39□□□□□ -0.91
RTTN-217ENST00000640393 DDX54Q8TDD1 881 aaKnown RBP9.39□□□□□ -0.91
RTTN-217ENST00000640393 F6X3S4 739 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 ADAM11O75078 769 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 ALX3O95076 343 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 SELPP16109 830 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 RASSF7Q02833 373 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 MRPL58Q14197 206 aaKnown RBP9.38□□□□□ -0.91
RTTN-217ENST00000640393 UBASH3BQ8TF42 649 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 WNT8BQ93098 351 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 DCAF5Q96JK2 942 aa9.38□□□□□ -0.91
RTTN-217ENST00000640393 CBX8Q9HC52 389 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms