RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ANO10Q9NW15 660 aa19.32■□□□□ 0.68
HNRNPU-228ENST00000640306 PHRF1Q9P1Y6 1649 aaKnown RBP19.32■□□□□ 0.68
HNRNPU-228ENST00000640306 NPHP1O15259 732 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 IL15P40933 162 aaPredicted RBP19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 AFDNP55196 1824 aaKnown RBP19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 EYA2O00167 538 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 CTAGE5O15320 804 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 SCARF1Q14162 830 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 DPCR1Q3MIW9 517 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 CEP57L1Q8IYX8 460 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 MRPS27Q92552 414 aaKnown RBP19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 KLF18A0A0U1RQI7 1052 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 DENND2AQ9ULE3 1009 aa19.31■□□□□ 0.68
HNRNPU-228ENST00000640306 PALLDQ8WX93 1383 aa19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 SALL1Q9NSC2 1324 aa19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 GOLGA8BA8MQT2 603 aa19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 RXRAP19793 462 aa19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 C8orf76Q96K31 380 aa19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 SMC2O95347 1197 aa19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 ZRSR1Q15695 479 aaKnown RBP19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 MRFAP1L1Q96HT8 127 aa19.3■□□□□ 0.68
HNRNPU-228ENST00000640306 AGXT2Q9BYV1 514 aa19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 ORC3Q9UBD5 711 aaPredicted RBP19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 RFX7Q2KHR2 1363 aa19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 PTPN14Q15678 1187 aa19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 TTC39AQ5SRH9 613 aa19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 SARM1Q6SZW1 724 aa19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 FMR1NBQ8N0W7 255 aaPredicted RBP19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 CEP126Q9P2H0 1117 aa19.29■□□□□ 0.68
HNRNPU-228ENST00000640306 PRC1O43663 620 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 CAVIN2O95810 425 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 FGAP02671 866 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 MARCKSP29966 332 aaPredicted RBP19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 AIFM3Q96NN9 605 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 CPLX1O14810 134 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 CDC25BP30305 580 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 CCZ1BP86790 482 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 CCZ1P86791 482 aaPredicted RBP19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 ZNF274Q96GC6 653 aaPredicted RBP19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 PUS7LQ9H0K6 701 aaKnown RBP19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 FOXP2O15409 715 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 PTPN21Q16825 1174 aa19.28■□□□□ 0.68
HNRNPU-228ENST00000640306 LAMA4Q16363 1823 aa19.27■□□□□ 0.68
HNRNPU-228ENST00000640306 SOS2Q07890 1332 aaPredicted RBP19.27■□□□□ 0.68
HNRNPU-228ENST00000640306 KIF28PB7ZC32 967 aa19.27■□□□□ 0.68
HNRNPU-228ENST00000640306 ZAP70P43403 619 aa19.27■□□□□ 0.68
HNRNPU-228ENST00000640306 LINC00301Q8NCQ3 95 aa19.27■□□□□ 0.68
HNRNPU-228ENST00000640306 ZNF215Q9UL58 517 aaPredicted RBP19.27■□□□□ 0.68
HNRNPU-228ENST00000640306 SYNE4Q8N205 404 aa19.27■□□□□ 0.67
HNRNPU-228ENST00000640306 FAM89AQ96GI7 184 aa19.27■□□□□ 0.67
HNRNPU-228ENST00000640306 XAGE2Q96GT9 111 aa19.27■□□□□ 0.67
HNRNPU-228ENST00000640306 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.67
HNRNPU-228ENST00000640306 SCN11AQ9UI33 1791 aa19.27■□□□□ 0.67
HNRNPU-228ENST00000640306 DMTNQ08495 405 aa19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 IMMTQ16891 758 aaKnown RBP19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 CCDC57Q2TAC2 916 aa19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 NKX2-3Q8TAU0 364 aa19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 IFNKQ9P0W0 207 aa19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 PAXBP1Q9Y5B6 917 aa19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 TAF7LQ5H9L4 462 aa19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 TMC6Q7Z403 805 aa19.26■□□□□ 0.67
HNRNPU-228ENST00000640306 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.26■□□□□ 0.677e-12■■■■□ 21.1
HNRNPU-228ENST00000640306 CCDC158Q5M9N0 1113 aa19.25■□□□□ 0.67
HNRNPU-228ENST00000640306 ADALQ6DHV7 355 aa19.25■□□□□ 0.67
HNRNPU-228ENST00000640306 NBPF11Q86T75 865 aa19.25■□□□□ 0.67
HNRNPU-228ENST00000640306 XPO4Q9C0E2 1151 aaKnown RBP19.25■□□□□ 0.67
HNRNPU-228ENST00000640306 RTEL1Q9NZ71 1219 aa19.25■□□□□ 0.67
HNRNPU-228ENST00000640306 SPTLC2O15270 562 aa19.25■□□□□ 0.67
HNRNPU-228ENST00000640306 KIAA1468Q9P260 1216 aa19.25■□□□□ 0.67
HNRNPU-228ENST00000640306 RALYLQ86SE5 291 aaKnown RBP19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 NAT10Q9H0A0 1025 aaKnown RBP19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 HPS5Q9UPZ3 1129 aa19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 ARFGEF2Q9Y6D5 1785 aa19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 LMOD1P29536 600 aaPredicted RBP19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 ANTXR2P58335 489 aa19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 MYSM1Q5VVJ2 828 aa19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 SYNE3Q6ZMZ3 975 aa19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 FBXO18Q8NFZ0 1043 aa19.24■□□□□ 0.67
HNRNPU-228ENST00000640306 ADAMTS7Q9UKP4 1686 aa19.23■□□□□ 0.67
HNRNPU-228ENST00000640306 SLC3A2P08195 630 aaKnown RBP19.23■□□□□ 0.67
HNRNPU-228ENST00000640306 RBM6P78332 1123 aaKnown RBP19.23■□□□□ 0.67
HNRNPU-228ENST00000640306 CCAR2Q8N163 923 aaKnown RBP19.23■□□□□ 0.67
HNRNPU-228ENST00000640306 ZNF202O95125 648 aa19.23■□□□□ 0.67
HNRNPU-228ENST00000640306 APPP05067 770 aa19.23■□□□□ 0.67
HNRNPU-228ENST00000640306 CAMTA1Q9Y6Y1 1673 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 TOM1L2Q6ZVM7 507 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 GPR108Q9NPR9 543 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 CTNNA3Q9UI47 895 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 GPAA1O43292 621 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 NYAP1Q6ZVC0 841 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 PHKBQ93100 1093 aa19.22■□□□□ 0.67
HNRNPU-228ENST00000640306 ZNF213O14771 459 aa19.21■□□□□ 0.67
HNRNPU-228ENST00000640306 ATP1A3P13637 1013 aa19.21■□□□□ 0.67
HNRNPU-228ENST00000640306 ELF2Q15723 593 aa19.21■□□□□ 0.67
HNRNPU-228ENST00000640306 HSP90AA4PQ58FG1 418 aa19.21■□□□□ 0.67
HNRNPU-228ENST00000640306 STK11IPQ8N1F8 1099 aa19.21■□□□□ 0.67
HNRNPU-228ENST00000640306 UBE2Q2LH0YL09 131 aa19.21■□□□□ 0.67
HNRNPU-228ENST00000640306 WDHD1O75717 1129 aaPredicted RBP19.21■□□□□ 0.67
HNRNPU-228ENST00000640306 PFKFB1P16118 471 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms