RNA–Protein interactions for RNA: ENST00000639498.1

KCNMA1-263, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-263ENST00000639498 USP6P35125 1406 aa13.72□□□□□ -0.21
KCNMA1-263ENST00000639498 MATR3P43243 847 aaKnown RBP eCLIP13.72□□□□□ -0.21
KCNMA1-263ENST00000639498 TYRO3Q06418 890 aa13.72□□□□□ -0.21
KCNMA1-263ENST00000639498 CETN1Q12798 172 aa13.72□□□□□ -0.21
KCNMA1-263ENST00000639498 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
KCNMA1-263ENST00000639498 ERMNQ8TAM6 284 aa13.72□□□□□ -0.21
KCNMA1-263ENST00000639498 TM6SF1Q9BZW5 370 aa13.72□□□□□ -0.21
KCNMA1-263ENST00000639498 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 KDRP35968 1356 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 IQGAP3Q86VI3 1631 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 CPA1P15085 419 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 HSPA4P34932 840 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 HEATR3Q7Z4Q2 680 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 LPIN2Q92539 896 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 FAM227BQ96M60 508 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 C6orf50Q9HD87 102 aa13.71□□□□□ -0.21
KCNMA1-263ENST00000639498 STAT6P42226 847 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 EXOC1Q9NV70 894 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 CCDC87Q9NVE4 849 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 ABCC3O15438 1527 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 GNPATO15228 680 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 CETN2P41208 172 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 HS1BP3Q53T59 392 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 TRIM47Q96LD4 638 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 DNAJC25Q9H1X3 360 aa13.71□□□□□ -0.22
KCNMA1-263ENST00000639498 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 DESP17661 470 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 MCM3P25205 808 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 NAPAP54920 295 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 RBM28Q9NW13 759 aaKnown RBP13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 SNW1Q13573 536 aaKnown RBP13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 PRIMPOLQ96LW4 560 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 CDC42BPAQ5VT25 1732 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 PAFAH1B1P43034 410 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 MAP9Q49MG5 647 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 BEND3Q5T5X7 828 aa13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
KCNMA1-263ENST00000639498 GPAA1O43292 621 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 KRT2P35908 639 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 CCDC129Q6ZRS4 1044 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 ARHGEF25Q86VW2 580 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 ZNF594Q96JF6 807 aaPredicted RBP13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 EYA3Q99504 573 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 AFMP43652 599 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 RRAGBQ5VZM2 374 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 ANGEL1Q9UNK9 670 aaKnown RBP13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 H0YHG0 523 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 KCNQ3O43525 872 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 PSMA7O14818 248 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 GNA11P29992 359 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 CLCN1P35523 988 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 CCDC186Q7Z3E2 898 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 PAXBP1Q9Y5B6 917 aa13.69□□□□□ -0.22
KCNMA1-263ENST00000639498 SKIDA1Q1XH10 827 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 CNBD1Q8NA66 436 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 CRACR2AQ9BSW2 395 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 MROH5Q6ZUA9 1318 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 F8W031 263 aaPredicted RBP13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 HIBADHP31937 336 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 DDX17Q92841 729 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 TFCP2L1Q9NZI6 479 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 ZKSCAN5Q9Y2L8 839 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 TTC6Q86TZ1 520 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 CCNL1Q9UK58 526 aaPredicted RBP13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 ZNF853P0CG23 659 aa13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 GSPT1P15170 499 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
KCNMA1-263ENST00000639498 IBTKQ9P2D0 1353 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 PICALMQ13492 652 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 RILPL1Q5EBL4 403 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 TCERG1LQ5VWI1 586 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 CCDC102AQ96A19 550 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 PRR36Q9H6K5 1346 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 TBCAO75347 108 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 SKILP12757 684 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 DSCC1Q9BVC3 393 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 B4E1Z4 1266 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 KRI1Q8N9T8 703 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 ALS2CR12Q96Q35 445 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 CGNQ9P2M7 1197 aaKnown RBP13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 PARP3Q9Y6F1 533 aa13.67□□□□□ -0.22
KCNMA1-263ENST00000639498 FAM160A1Q05DH4 1040 aa13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 EHBP1Q8NDI1 1231 aa13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 RBM17Q96I25 401 aaKnown RBP13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 FBXO3Q9UK99 471 aa13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 POTEB2H3BUK9 544 aa13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 TUBB4AP04350 444 aa13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 PPP2R5BQ15173 497 aa13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 DHX58Q96C10 678 aa13.66□□□□□ -0.22
KCNMA1-263ENST00000639498 DEXIO95424 95 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms