RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	TTC31	Q49AM3	519 aa	Predicted RBP	18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MORC4	Q8TE76	937 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	SLC12A1	Q13621	1099 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	SELENOO	Q9BVL4	669 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	LZTFL1	Q9NQ48	299 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	KIF3C	O14782	793 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	UBASH3A	P57075	661 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	USH1G	Q495M9	461 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	FAM114A1	Q8IWE2	563 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	WDR48	Q8TAF3	677 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MRPL46	Q9H2W6	279 aa	Known RBP	18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ORC3	Q9UBD5	711 aa	Predicted RBP	18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	GUCA1B	Q9UMX6	200 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	CNPY2	Q9Y2B0	182 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	ANKRD30B	Q9BXX2	1392 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MGARP	Q8TDB4	240 aa		18.47	■□□□□ 0.55
CACNA1A-238	ENST00000637276	NBPF8	Q3BBV2	869 aa		18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	FBLN1	P23142	703 aa		18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	NEK1	Q96PY6	1258 aa		18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	SETDB2	Q96T68	719 aa		18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MED10	Q9BTT4	135 aa		18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	VPS18	Q9P253	973 aa		18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	MAPK8IP1	Q9UQF2	711 aa		18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	LEO1	Q8WVC0	666 aa	Predicted RBP	18.46	■□□□□ 0.55
CACNA1A-238	ENST00000637276	SPDYE3	A6NKU9	549 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ZBTB24	O43167	697 aa	Predicted RBP	18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	POLD1	P28340	1107 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	BICDL2	A1A5D9	508 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ANO6	Q4KMQ2	910 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SSH1	Q8WYL5	1049 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	NAIP	Q13075	1403 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	FGD6	Q6ZV73	1430 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	PRR16	Q569H4	304 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	NXN	Q6DKJ4	435 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	POMGNT1	Q8WZA1	660 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	FAM180A	Q6UWF9	173 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CAPN12	Q6ZSI9	719 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	UBE3B	Q7Z3V4	1068 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	NME9	Q86XW9	330 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CRNKL1	Q9BZJ0	848 aa	Known RBP	18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	WTAP	Q15007	396 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	PHAX	Q9H814	394 aa	Known RBP	18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ANLN	Q9NQW6	1124 aa		18.45	■□□□□ 0.54
CACNA1A-238	ENST00000637276	FAM83G	A6ND36	823 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	KCTD17	Q8N5Z5	321 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	FBXW4	P57775	412 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	TCP10	Q12799	353 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	MKRN3	Q13064	507 aa	Known RBP	18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CXorf38	Q8TB03	319 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	HCLS1	P14317	486 aa	Predicted RBP	18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	UBXN1	Q04323	297 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	FAM204A	Q9H8W3	233 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CCT6A	P40227	531 aa	Known RBP	18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276		Q3C1V9	767 aa		18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	NSRP1	Q9H0G5	558 aa	Known RBP	18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	TTC12	Q9H892	705 aa	Predicted RBP	18.44	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CADPS	Q9ULU8	1353 aa		18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ITIH3	Q06033	890 aa		18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ACBD5	Q5T8D3	534 aa	Predicted RBP	18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ARHGEF2	Q92974	986 aa	Known RBP	18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	PSMB7	Q99436	277 aa		18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CPLX4	Q7Z7G2	160 aa		18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	TBC1D2	Q9BYX2	928 aa		18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	KLF18	A0A0U1RQI7	1052 aa		18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.43	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ZSCAN23	Q3MJ62	389 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SEPT8	Q92599	483 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CALCOCO1	Q9P1Z2	691 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	NOP56	O00567	594 aa	Known RBP	18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CCDC14	Q49A88	953 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	METTL13	Q8N6R0	699 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ZNF653	Q96CK0	615 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	FANCD2	Q9BXW9	1451 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	GIPC1	O14908	333 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CCDC129	Q6ZRS4	1044 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	DNAI1	Q9UI46	699 aa		18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	RNF41	Q9H4P4	317 aa	Predicted RBP	18.42	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SCAPER	Q9BY12	1400 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ERMN	Q8TAM6	284 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SLC39A6	Q13433	755 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	PARP3	Q9Y6F1	533 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SMIM24	O75264	130 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CCDC172	P0C7W6	258 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	RYBP	Q8N488	228 aa	Predicted RBP	18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	FNBP1	Q96RU3	617 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	C6orf50	Q9HD87	102 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	EMILIN1	Q9Y6C2	1016 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	UBAP1L	F5GYI3	381 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	TBC1D9	Q6ZT07	1266 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	AOPEP	Q8N6M6	819 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	GOLGA1	Q92805	767 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CDC5L	Q99459	802 aa	Known RBP	18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	ALG1	Q9BT22	464 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	SLFN5	Q08AF3	891 aa		18.41	■□□□□ 0.54
CACNA1A-238	ENST00000637276	CCDC121	Q6ZUS5	278 aa		18.41	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms