RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 UQCRFS1P1P0C7P4 283 aa23.06■■□□□ 1.28
MECP2-216ENST00000627864 DPY19L2Q6NUT2 758 aa23.06■■□□□ 1.28
MECP2-216ENST00000627864 MYO5AQ9Y4I1 1855 aaKnown RBP23.06■■□□□ 1.28
MECP2-216ENST00000627864 ARID4AP29374 1257 aaPredicted RBP23.05■■□□□ 1.28
MECP2-216ENST00000627864 STRIP1Q5VSL9 837 aa23.05■■□□□ 1.28
MECP2-216ENST00000627864 DENND2AQ9ULE3 1009 aa23.05■■□□□ 1.28
MECP2-216ENST00000627864 SEMA3EO15041 775 aa23.04■■□□□ 1.28
MECP2-216ENST00000627864 DDNO94850 711 aaPredicted RBP23.04■■□□□ 1.28
MECP2-216ENST00000627864 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
MECP2-216ENST00000627864 OTUD7AQ8TE49 926 aaPredicted RBP23.04■■□□□ 1.28
MECP2-216ENST00000627864 FAM205AQ6ZU69 1335 aa23.04■■□□□ 1.28
MECP2-216ENST00000627864 VIL1P09327 827 aaKnown RBP23.03■■□□□ 1.28
MECP2-216ENST00000627864 SCARF1Q14162 830 aa23.03■■□□□ 1.28
MECP2-216ENST00000627864 GPC2Q8N158 579 aa23.03■■□□□ 1.28
MECP2-216ENST00000627864 ZNF512BQ96KM6 892 aaPredicted RBP23.03■■□□□ 1.28
MECP2-216ENST00000627864 MXD3Q9BW11 206 aa23.03■■□□□ 1.28
MECP2-216ENST00000627864 SNRKQ9NRH2 765 aa23.03■■□□□ 1.28
MECP2-216ENST00000627864 GLTPD2A6NH11 291 aa23.02■■□□□ 1.28
MECP2-216ENST00000627864 MCAMP43121 646 aa23.02■■□□□ 1.28
MECP2-216ENST00000627864 DACT2Q5SW24 774 aa23.02■■□□□ 1.28
MECP2-216ENST00000627864 GPATCH3Q96I76 525 aa23.02■■□□□ 1.28
MECP2-216ENST00000627864 HMG20BQ9P0W2 317 aa23.02■■□□□ 1.28
MECP2-216ENST00000627864 COL1A1P02452 1464 aaPredicted RBP23.02■■□□□ 1.28
MECP2-216ENST00000627864 RSBN1LQ6PCB5 846 aaPredicted RBP23.01■■□□□ 1.27
MECP2-216ENST00000627864 PI16Q6UXB8 463 aa23.01■■□□□ 1.27
MECP2-216ENST00000627864 SPATA5Q8NB90 893 aa23.01■■□□□ 1.27
MECP2-216ENST00000627864 ECHDC1Q9NTX5 307 aa23.01■■□□□ 1.27
MECP2-216ENST00000627864 ZBTB12Q9Y330 459 aaPredicted RBP23.01■■□□□ 1.27
MECP2-216ENST00000627864 ZBTB22O15209 634 aa23■■□□□ 1.27
MECP2-216ENST00000627864 MX1P20591 662 aa23■■□□□ 1.27
MECP2-216ENST00000627864 WDR66Q8TBY9 1149 aa23■■□□□ 1.27
MECP2-216ENST00000627864 ATP5JP18859 108 aa22.99■■□□□ 1.27
MECP2-216ENST00000627864 GMPSP49915 693 aaPredicted RBP22.99■■□□□ 1.27
MECP2-216ENST00000627864 MFSD14BQ5SR56 506 aa22.99■■□□□ 1.27
MECP2-216ENST00000627864 TSHZ3Q63HK5 1081 aa22.99■■□□□ 1.27
MECP2-216ENST00000627864 CERS5Q8N5B7 392 aa22.99■■□□□ 1.27
MECP2-216ENST00000627864 TBC1D22AQ8WUA7 517 aa22.99■■□□□ 1.27
MECP2-216ENST00000627864 BOLA2Q9H3K6 86 aa22.99■■□□□ 1.27
MECP2-216ENST00000627864 ZAP70P43403 619 aa22.98■■□□□ 1.27
MECP2-216ENST00000627864 FKBP1AP62942 108 aaKnown RBP22.98■■□□□ 1.27
MECP2-216ENST00000627864 AGBL3Q8NEM8 1001 aa22.98■■□□□ 1.27
MECP2-216ENST00000627864 ZNF526Q8TF50 670 aaPredicted RBP22.98■■□□□ 1.27
MECP2-216ENST00000627864 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.98■■□□□ 1.27
MECP2-216ENST00000627864 PDS5AQ29RF7 1337 aaKnown RBP22.98■■□□□ 1.27
MECP2-216ENST00000627864 TTC41PQ6P2S7 1318 aa22.98■■□□□ 1.27
MECP2-216ENST00000627864 SALL3Q9BXA9 1300 aa22.98■■□□□ 1.27
MECP2-216ENST00000627864 SCN4AP35499 1836 aa22.98■■□□□ 1.27
MECP2-216ENST00000627864 WDR90Q96KV7 1748 aa22.97■■□□□ 1.27
MECP2-216ENST00000627864 RPS12P25398 132 aaKnown RBP22.97■■□□□ 1.27
MECP2-216ENST00000627864 PDE4AP27815 886 aa22.97■■□□□ 1.27
MECP2-216ENST00000627864 NDUFB9Q9Y6M9 179 aa22.97■■□□□ 1.27
MECP2-216ENST00000627864 MYO3BQ8WXR4 1341 aa22.97■■□□□ 1.27
MECP2-216ENST00000627864 MYH2Q9UKX2 1941 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 ERC2O15083 957 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 YY1P25490 414 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 PDE1AP54750 535 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 TBC1D9Q6ZT07 1266 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 PLEKHM2Q8IWE5 1019 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 GMLQ99445 158 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 DNAJC2Q99543 621 aaKnown RBP22.96■■□□□ 1.27
MECP2-216ENST00000627864 ABCF2Q9UG63 623 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 STAP2Q9UGK3 403 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 MYH7P12883 1935 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 AK9Q5TCS8 1911 aa22.96■■□□□ 1.27
MECP2-216ENST00000627864 F8W031 263 aaPredicted RBP22.95■■□□□ 1.26
MECP2-216ENST00000627864 GRIK5Q16478 980 aa22.95■■□□□ 1.26
MECP2-216ENST00000627864 KIAA0825Q8IV33 1275 aa22.95■■□□□ 1.26
MECP2-216ENST00000627864 DOCK2Q92608 1830 aa22.95■■□□□ 1.26
MECP2-216ENST00000627864 DPF2Q92785 391 aa22.95■■□□□ 1.26
MECP2-216ENST00000627864 CNOT7Q9UIV1 285 aaKnown RBP22.95■■□□□ 1.26
MECP2-216ENST00000627864 UTRNP46939 3433 aa22.95■■□□□ 1.26
MECP2-216ENST00000627864 SALL1Q9NSC2 1324 aa22.94■■□□□ 1.26
MECP2-216ENST00000627864 CYP2E1P05181 493 aaPredicted RBP22.94■■□□□ 1.26
MECP2-216ENST00000627864 LMOD1P29536 600 aaPredicted RBP22.94■■□□□ 1.26
MECP2-216ENST00000627864 ZGPATQ8N5A5 531 aaKnown RBP22.94■■□□□ 1.26
MECP2-216ENST00000627864 PI4K2BQ8TCG2 481 aa22.94■■□□□ 1.26
MECP2-216ENST00000627864 L3MBTL3Q96JM7 780 aaPredicted RBP22.94■■□□□ 1.26
MECP2-216ENST00000627864 HAUS7Q99871 368 aa22.94■■□□□ 1.26
MECP2-216ENST00000627864 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
MECP2-216ENST00000627864 GLRX3O76003 335 aaKnown RBP22.93■■□□□ 1.26
MECP2-216ENST00000627864 USP17L8P0C7I0 530 aa22.93■■□□□ 1.26
MECP2-216ENST00000627864 SCNN1DP51172 638 aa22.93■■□□□ 1.26
MECP2-216ENST00000627864 SPTY2D1Q68D10 685 aaPredicted RBP22.93■■□□□ 1.26
MECP2-216ENST00000627864 GPRC5DQ9NZD1 345 aa22.93■■□□□ 1.26
MECP2-216ENST00000627864 SHTN1A0MZ66 631 aa22.92■■□□□ 1.26
MECP2-216ENST00000627864 GOLIM4O00461 696 aa22.92■■□□□ 1.26
MECP2-216ENST00000627864 LDHBP07195 334 aaKnown RBP22.92■■□□□ 1.26
MECP2-216ENST00000627864 EPS15P42566 896 aa22.92■■□□□ 1.26
MECP2-216ENST00000627864 MICALL2Q8IY33 904 aa22.92■■□□□ 1.26
MECP2-216ENST00000627864 ANTXR1Q9H6X2 564 aa22.92■■□□□ 1.26
MECP2-216ENST00000627864 RRAGCQ9HB90 399 aa22.92■■□□□ 1.26
MECP2-216ENST00000627864 PIH1D3Q9NQM4 214 aaKnown RBP22.92■■□□□ 1.26
MECP2-216ENST00000627864 LRP2BPQ9P2M1 347 aa22.92■■□□□ 1.26
MECP2-216ENST00000627864 TTF2Q9UNY4 1162 aaKnown RBP22.92■■□□□ 1.26
MECP2-216ENST00000627864 ADAMTSL1Q8N6G6 1762 aa22.91■■□□□ 1.26
MECP2-216ENST00000627864 H7C1D1 291 aa22.91■■□□□ 1.26
MECP2-216ENST00000627864 MAP4K4O95819 1239 aaPredicted RBP22.91■■□□□ 1.26
MECP2-216ENST00000627864 PRDX5P30044 214 aa22.91■■□□□ 1.26
MECP2-216ENST00000627864 ERICH6Q7L0X2 663 aa22.91■■□□□ 1.26
MECP2-216ENST00000627864 SKAP1Q86WV1 359 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms