RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 GYG1P46976 350 aa17.3■□□□□ 0.36
SNRPA1-216ENST00000626000 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
SNRPA1-216ENST00000626000 PGAP2Q9UHJ9 254 aa17.3■□□□□ 0.36
SNRPA1-216ENST00000626000 ZNF646O15015 1829 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-216ENST00000626000 SURF6O75683 361 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-216ENST00000626000 AAMPQ13685 434 aa17.29■□□□□ 0.36
SNRPA1-216ENST00000626000 KIF4BQ2VIQ3 1234 aa17.29■□□□□ 0.36
SNRPA1-216ENST00000626000 C1orf115Q9H7X2 142 aa17.29■□□□□ 0.36
SNRPA1-216ENST00000626000 SUGT1Q9Y2Z0 365 aa17.29■□□□□ 0.36
SNRPA1-216ENST00000626000 MYH13Q9UKX3 1938 aa17.28■□□□□ 0.36
SNRPA1-216ENST00000626000 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
SNRPA1-216ENST00000626000 MYOZ2Q9NPC6 264 aa17.28■□□□□ 0.36
SNRPA1-216ENST00000626000 MAST3O60307 1309 aa17.27■□□□□ 0.36
SNRPA1-216ENST00000626000 WDR66Q8TBY9 1149 aa17.27■□□□□ 0.36
SNRPA1-216ENST00000626000 PDS5AQ29RF7 1337 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 PITPNM2Q9BZ72 1349 aa17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 A0A1B0GUL7 405 aa17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 TFCP2Q12800 502 aa17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 MFSD14BQ5SR56 506 aa17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 GORABQ5T7V8 394 aa17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 DCPSQ96C86 337 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 DENND2AQ9ULE3 1009 aa17.26■□□□□ 0.35
SNRPA1-216ENST00000626000 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
SNRPA1-216ENST00000626000 POTEJP0CG39 1038 aa17.25■□□□□ 0.35
SNRPA1-216ENST00000626000 BCAMP50895 628 aa17.25■□□□□ 0.35
SNRPA1-216ENST00000626000 TBC1D10BQ4KMP7 808 aaPredicted RBP17.25■□□□□ 0.35
SNRPA1-216ENST00000626000 SAMD7Q7Z3H4 446 aa17.25■□□□□ 0.35
SNRPA1-216ENST00000626000 KIAA0825Q8IV33 1275 aa17.25■□□□□ 0.35
SNRPA1-216ENST00000626000 TRPM4Q8TD43 1214 aa17.25■□□□□ 0.35
SNRPA1-216ENST00000626000 PASKQ96RG2 1323 aa17.24■□□□□ 0.35
SNRPA1-216ENST00000626000 MYO1BO43795 1136 aa17.24■□□□□ 0.35
SNRPA1-216ENST00000626000 RAB11FIP3O75154 756 aa17.24■□□□□ 0.35
SNRPA1-216ENST00000626000 HDLBPQ00341 1268 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-216ENST00000626000 C20orf194Q5TEA3 1177 aa17.24■□□□□ 0.35
SNRPA1-216ENST00000626000 SULF1Q8IWU6 871 aa17.24■□□□□ 0.35
SNRPA1-216ENST00000626000 MTMR14Q8NCE2 650 aa17.24■□□□□ 0.35
SNRPA1-216ENST00000626000 IGSF3O75054 1194 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 DLGAP5Q15398 846 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 CREBZFQ9NS37 354 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 SERPINA10Q9UK55 444 aa17.23■□□□□ 0.35
SNRPA1-216ENST00000626000 SALL1Q9NSC2 1324 aa17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 HIRAP54198 1017 aaPredicted RBP17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 RBM26Q5T8P6 1007 aaKnown RBP17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 KIF1BPQ96EK5 621 aa17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 MRIQ9BWK5 157 aa17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
SNRPA1-216ENST00000626000 TRPM7Q96QT4 1865 aa17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 COL1A1P02452 1464 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 TIMM10P62072 90 aa17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 CHAF1AQ13111 956 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 SCARF1Q14162 830 aa17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 SPTY2D1Q68D10 685 aaPredicted RBP17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 APOBEC3FQ8IUX4 373 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 CERS5Q8N5B7 392 aa17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 GGA3Q9NZ52 723 aa17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 TTF2Q9UNY4 1162 aaKnown RBP17.21■□□□□ 0.35
SNRPA1-216ENST00000626000 CEP350Q5VT06 3117 aa17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 SHTN1A0MZ66 631 aa17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 TMEM88BA6NKF7 163 aa17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 PHKA1P46020 1223 aa17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 CLASRPQ8N2M8 674 aaKnown RBP17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 ZNF512BQ96KM6 892 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 MXD3Q9BW11 206 aa17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 IQSEC3Q9UPP2 1182 aaPredicted RBP17.2■□□□□ 0.34
SNRPA1-216ENST00000626000 WNT10BO00744 389 aa17.19■□□□□ 0.34
SNRPA1-216ENST00000626000 TEKT1Q969V4 418 aa17.19■□□□□ 0.34
SNRPA1-216ENST00000626000 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
SNRPA1-216ENST00000626000 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 EGFRP00533 1210 aa17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 ADORA1P30542 326 aa17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 RBM5P52756 815 aaKnown RBP eCLIP17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 ANGEL2Q5VTE6 544 aaKnown RBP17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 ZBED3Q96IU2 234 aaPredicted RBP17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 PPP2R3BQ9Y5P8 575 aa17.18■□□□□ 0.34
SNRPA1-216ENST00000626000 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 RASGRF1Q13972 1273 aa17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 CFAP100Q494V2 611 aa17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 TTC39AQ5SRH9 613 aa17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 HHIPL2Q6UWX4 724 aa17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
SNRPA1-216ENST00000626000 GLIS2Q9BZE0 524 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms