RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ZNF213O14771 459 aa19.37■□□□□ 0.69
LDB3-208ENST00000623007 RASGRF1Q13972 1273 aa19.37■□□□□ 0.69
LDB3-208ENST00000623007 ME3Q16798 604 aa19.37■□□□□ 0.69
LDB3-208ENST00000623007 KLHL40Q2TBA0 621 aa19.37■□□□□ 0.69
LDB3-208ENST00000623007 L1TD1Q5T7N2 865 aaKnown RBP19.37■□□□□ 0.69
LDB3-208ENST00000623007 CNBD1Q8NA66 436 aa19.37■□□□□ 0.69
LDB3-208ENST00000623007 AIDAQ96BJ3 306 aa19.37■□□□□ 0.69
LDB3-208ENST00000623007 E7EWF7 191 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 STX6O43752 255 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 VPS37DQ86XT2 251 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 TPCN1Q9ULQ1 816 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 ZDHHC9Q9Y397 364 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 ZNF532Q9HCE3 1301 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 BRWD3Q6RI45 1802 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 PLSCR1O15162 318 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 CPA1P15085 419 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 ST5P78524 1137 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 TRDNQ13061 729 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 TOB2Q14106 344 aaPredicted RBP19.36■□□□□ 0.69
LDB3-208ENST00000623007 NCOA7Q8NI08 942 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 NACAP1Q9BZK3 213 aa19.36■□□□□ 0.69
LDB3-208ENST00000623007 PUS7LQ9H0K6 701 aaKnown RBP19.36■□□□□ 0.69
LDB3-208ENST00000623007 PIH1D3Q9NQM4 214 aaKnown RBP19.36■□□□□ 0.69
LDB3-208ENST00000623007 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
LDB3-208ENST00000623007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.35■□□□□ 0.69
LDB3-208ENST00000623007 MBD3O95983 291 aa19.35■□□□□ 0.69
LDB3-208ENST00000623007 ZSCAN22P10073 491 aaPredicted RBP19.35■□□□□ 0.69
LDB3-208ENST00000623007 RALYLQ86SE5 291 aaKnown RBP19.35■□□□□ 0.69
LDB3-208ENST00000623007 CCDC83Q8IWF9 413 aa19.35■□□□□ 0.69
LDB3-208ENST00000623007 FLAD1Q8NFF5 587 aa19.35■□□□□ 0.69
LDB3-208ENST00000623007 TCRBV5S4A2TA0A5A2 114 aa19.34■□□□□ 0.69
LDB3-208ENST00000623007 FGAP02671 866 aa19.34■□□□□ 0.69
LDB3-208ENST00000623007 GJB2P29033 226 aa19.34■□□□□ 0.69
LDB3-208ENST00000623007 MCM5P33992 734 aa19.34■□□□□ 0.69
LDB3-208ENST00000623007 EXOSC10Q01780 885 aaKnown RBP19.34■□□□□ 0.69
LDB3-208ENST00000623007 MCTP1Q6DN14 999 aa19.34■□□□□ 0.69
LDB3-208ENST00000623007 PI16Q6UXB8 463 aa19.34■□□□□ 0.69
LDB3-208ENST00000623007 Q6ZUG5 572 aa19.34■□□□□ 0.69
LDB3-208ENST00000623007 ZNF274Q96GC6 653 aaPredicted RBP19.34■□□□□ 0.69
LDB3-208ENST00000623007 PATL2C9JE40 543 aaKnown RBP19.33■□□□□ 0.69
LDB3-208ENST00000623007 NCLP19338 710 aaKnown RBP19.33■□□□□ 0.69
LDB3-208ENST00000623007 HMGN5P82970 282 aaKnown RBP19.33■□□□□ 0.69
LDB3-208ENST00000623007 NFIXQ14938 502 aa19.33■□□□□ 0.69
LDB3-208ENST00000623007 TMC4Q7Z404 712 aa19.33■□□□□ 0.69
LDB3-208ENST00000623007 KLHL34Q8N239 644 aa19.33■□□□□ 0.69
LDB3-208ENST00000623007 GTF3C6Q969F1 213 aa19.33■□□□□ 0.69
LDB3-208ENST00000623007 LRRC4BQ9NT99 713 aa19.33■□□□□ 0.69
LDB3-208ENST00000623007 LRP2BPQ9P2M1 347 aa19.33■□□□□ 0.69
LDB3-208ENST00000623007 LEMD3Q9Y2U8 911 aa19.33■□□□□ 0.69
LDB3-208ENST00000623007 DHX16O60231 1041 aaKnown RBP19.33■□□□□ 0.68
LDB3-208ENST00000623007 SYT1P21579 422 aa19.33■□□□□ 0.68
LDB3-208ENST00000623007 BCAMP50895 628 aa19.33■□□□□ 0.68
LDB3-208ENST00000623007 EVCP57679 992 aa19.33■□□□□ 0.68
LDB3-208ENST00000623007 GRAPQ13588 217 aa19.33■□□□□ 0.68
LDB3-208ENST00000623007 PKP1Q13835 747 aa19.33■□□□□ 0.68
LDB3-208ENST00000623007 RGS22Q8NE09 1264 aa19.33■□□□□ 0.68
LDB3-208ENST00000623007 GRAPLQ8TC17 118 aaPredicted RBP19.33■□□□□ 0.68
LDB3-208ENST00000623007 DDX49Q9Y6V7 483 aaKnown RBP19.33■□□□□ 0.68
LDB3-208ENST00000623007 LAMA4Q16363 1823 aa19.32■□□□□ 0.68
LDB3-208ENST00000623007 PHF14O94880 888 aa19.32■□□□□ 0.68
LDB3-208ENST00000623007 CELF1Q92879 486 aaKnown RBP19.32■□□□□ 0.68
LDB3-208ENST00000623007 STRBPQ96SI9 672 aaKnown RBP19.32■□□□□ 0.68
LDB3-208ENST00000623007 MTA3Q9BTC8 594 aa19.32■□□□□ 0.68
LDB3-208ENST00000623007 PFKFB2O60825 505 aa19.31■□□□□ 0.68
LDB3-208ENST00000623007 CHGBP05060 677 aa19.31■□□□□ 0.68
LDB3-208ENST00000623007 POTEAQ6S8J7 498 aa19.31■□□□□ 0.68
LDB3-208ENST00000623007 FBXO33Q7Z6M2 555 aa19.31■□□□□ 0.68
LDB3-208ENST00000623007 MAGEB6Q8N7X4 407 aa19.31■□□□□ 0.68
LDB3-208ENST00000623007 CNNM2Q9H8M5 875 aa19.31■□□□□ 0.68
LDB3-208ENST00000623007 TRIM37O94972 964 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 STOX1Q6ZVD7 989 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 C3orf67Q6ZVT6 689 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 RPGRQ92834 1020 aaKnown RBP19.3■□□□□ 0.68
LDB3-208ENST00000623007 LMBRD1Q9NUN5 540 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 LARGE1O95461 756 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 F13A1P00488 732 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 APPP05067 770 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 GYS1P13807 737 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 NT5C2P49902 561 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 TXNRD1Q16881 649 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 LARP1BQ659C4 914 aaKnown RBP19.3■□□□□ 0.68
LDB3-208ENST00000623007 SPTY2D1Q68D10 685 aaPredicted RBP19.3■□□□□ 0.68
LDB3-208ENST00000623007 C15orf52Q6ZUT6 534 aaKnown RBP19.3■□□□□ 0.68
LDB3-208ENST00000623007 BRF1Q92994 677 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
LDB3-208ENST00000623007 RGPD3A6NKT7 1758 aaPredicted RBP19.29■□□□□ 0.68
LDB3-208ENST00000623007 RGPD4Q7Z3J3 1758 aa19.29■□□□□ 0.68
LDB3-208ENST00000623007 TM4SF1P30408 202 aa19.29■□□□□ 0.68
LDB3-208ENST00000623007 HIBADHP31937 336 aaKnown RBP19.29■□□□□ 0.68
LDB3-208ENST00000623007 CRY2Q49AN0 593 aa19.29■□□□□ 0.68
LDB3-208ENST00000623007 TMEM87AQ8NBN3 555 aa19.29■□□□□ 0.68
LDB3-208ENST00000623007 SYAP1Q96A49 352 aaPredicted RBP19.29■□□□□ 0.68
LDB3-208ENST00000623007 RBM17Q96I25 401 aaKnown RBP19.29■□□□□ 0.68
LDB3-208ENST00000623007 NAPBQ9H115 298 aa19.29■□□□□ 0.68
LDB3-208ENST00000623007 TAF6LQ9Y6J9 622 aa19.29■□□□□ 0.68
LDB3-208ENST00000623007 DUOX1Q9NRD9 1551 aa19.29■□□□□ 0.68
LDB3-208ENST00000623007 NLGN1Q8N2Q7 840 aa19.28■□□□□ 0.68
LDB3-208ENST00000623007 TMEM87BQ96K49 555 aa19.28■□□□□ 0.68
LDB3-208ENST00000623007 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
LDB3-208ENST00000623007 RNF41Q9H4P4 317 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms