RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CCDC30Q5VVM6 783 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 TTLL5Q6EMB2 1281 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 STK31Q9BXU1 1019 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 LRP5O75197 1615 aa11.98□□□□□ -0.49
VPS11-207ENST00000620429 GNAT3A8MTJ3 354 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 MPHOSPH10O00566 681 aaKnown RBP11.97□□□□□ -0.49
VPS11-207ENST00000620429 AK2P54819 239 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 TEX11Q8IYF3 940 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 CCDC151A5D8V7 595 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 NAIF1Q69YI7 327 aaPredicted RBP11.97□□□□□ -0.49
VPS11-207ENST00000620429 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 OSBPL5Q9H0X9 879 aaPredicted RBP11.97□□□□□ -0.49
VPS11-207ENST00000620429 TNMDQ9H2S6 317 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 MCM8Q9UJA3 840 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 LIMCH1Q9UPQ0 1083 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 AKAP2Q9Y2D5 859 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 SNX14Q9Y5W7 946 aa11.97□□□□□ -0.49
VPS11-207ENST00000620429 ANKRD65E5RJM6 399 aa11.96□□□□□ -0.49
VPS11-207ENST00000620429 CTAGE5O15320 804 aa11.96□□□□□ -0.49
VPS11-207ENST00000620429 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.49
VPS11-207ENST00000620429 GPTP24298 496 aa11.96□□□□□ -0.49
VPS11-207ENST00000620429 LONRF2Q1L5Z9 754 aa11.96□□□□□ -0.49
VPS11-207ENST00000620429 TATDN2Q93075 761 aa11.96□□□□□ -0.49
VPS11-207ENST00000620429 VEZTQ9HBM0 779 aa11.96□□□□□ -0.49
VPS11-207ENST00000620429 DDX19AQ9NUU7 478 aaKnown RBP11.96□□□□□ -0.49
VPS11-207ENST00000620429 BRD3Q15059 726 aa11.96□□□□□ -0.49
VPS11-207ENST00000620429 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 CCP110O43303 1012 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 EPB41L2O43491 1005 aaKnown RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 DTNBO60941 627 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 DNM1Q05193 864 aaKnown RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 OS9Q13438 667 aaPredicted RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 DHX8Q14562 1220 aaKnown RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 IQCB1Q15051 598 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 RSRC2Q7L4I2 434 aaKnown RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 HNRNPLLQ8WVV9 542 aaKnown RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 IP6K1Q92551 441 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 C8orf37Q96NL8 207 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 CARD6Q9BX69 1037 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 IMPACTQ9P2X3 320 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 TMCO5BA8MYB1 307 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 NEBLO76041 1014 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 ADCY2Q08462 1091 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 FLIIQ13045 1269 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 CRYMQ14894 314 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 RASEFQ8IZ41 740 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 RABGGTAQ92696 567 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 DDX11Q96FC9 970 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 TTC14Q96N46 770 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 USP21Q9UK80 565 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 SLIT2O94813 1529 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 SCRN1Q12765 414 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 TTC19Q6DKK2 380 aaPredicted RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 CPLX2Q6PUV4 134 aaKnown RBP11.95□□□□□ -0.5
VPS11-207ENST00000620429 PARD6BQ9BYG5 372 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 USP16Q9Y5T5 823 aa11.95□□□□□ -0.5
VPS11-207ENST00000620429 AOX1Q06278 1338 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 GOLGA6L19H0YKK7 550 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 EIF3JO75822 258 aaKnown RBP11.94□□□□□ -0.5
VPS11-207ENST00000620429 CPA1P15085 419 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 GRIK3Q13003 919 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 CAMK4Q16566 473 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 CLSTN2Q9H4D0 955 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 LGR6Q9HBX8 967 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 PDE11AQ9HCR9 933 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 ETAA1Q9NY74 926 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 POTEDQ86YR6 584 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 CCDC83Q8IWF9 413 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 CKAP2LQ8IYA6 745 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 PRPF38AQ8NAV1 312 aaKnown RBP11.94□□□□□ -0.5
VPS11-207ENST00000620429 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
VPS11-207ENST00000620429 JPH2Q9BR39 696 aaPredicted RBP11.94□□□□□ -0.5
VPS11-207ENST00000620429 DNAJC25Q9H1X3 360 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 PARP3Q9Y6F1 533 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 BCL9LQ86UU0 1499 aa11.94□□□□□ -0.5
VPS11-207ENST00000620429 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
VPS11-207ENST00000620429 EXOC5O00471 708 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 NFAT5O94916 1531 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 IPO7O95373 1038 aaKnown RBP11.93□□□□□ -0.5
VPS11-207ENST00000620429 LARGE1O95461 756 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 GJB2P29033 226 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 MRPL12P52815 198 aaKnown RBP11.93□□□□□ -0.5
VPS11-207ENST00000620429 TBC1D8BQ0IIM8 1120 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 CCDC150Q8NCX0 1101 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 CTCFLQ8NI51 663 aaPredicted RBP11.93□□□□□ -0.5
VPS11-207ENST00000620429 FAM71BQ8TC56 605 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 TRIM6Q9C030 488 aaPredicted RBP11.93□□□□□ -0.5
VPS11-207ENST00000620429 CHMP3Q9Y3E7 222 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 SURF6O75683 361 aaKnown RBP11.93□□□□□ -0.5
VPS11-207ENST00000620429 GCP02774 474 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 PAX7P23759 505 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 TRIM65Q6PJ69 517 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 HDXQ7Z353 690 aa11.93□□□□□ -0.5
VPS11-207ENST00000620429 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms