RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 UBASH3AP57075 661 aa16.83■□□□□ 0.29
SYNRG-225ENST00000619541 FANCCQ00597 558 aa16.83■□□□□ 0.29
SYNRG-225ENST00000619541 MAP4K1Q92918 833 aa16.83■□□□□ 0.29
SYNRG-225ENST00000619541 WWC2Q6AWC2 1192 aa16.83■□□□□ 0.28
SYNRG-225ENST00000619541 SRRTQ9BXP5 876 aaKnown RBP16.83■□□□□ 0.28
SYNRG-225ENST00000619541 DEF6Q9H4E7 631 aa16.83■□□□□ 0.28
SYNRG-225ENST00000619541 NCOA5Q9HCD5 579 aaKnown RBP16.83■□□□□ 0.28
SYNRG-225ENST00000619541 JRKLQ9Y4A0 524 aa16.83■□□□□ 0.28
SYNRG-225ENST00000619541 NDUFB9Q9Y6M9 179 aa16.83■□□□□ 0.28
SYNRG-225ENST00000619541 SLC3A2P08195 630 aaKnown RBP16.83■□□□□ 0.28
SYNRG-225ENST00000619541 OTUD7BQ6GQQ9 843 aa16.83■□□□□ 0.28
SYNRG-225ENST00000619541 H3BQF6 201 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 CHRNA2Q15822 529 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 LONRF2Q1L5Z9 754 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 PLEKHO1Q53GL0 409 aaPredicted RBP16.82■□□□□ 0.28
SYNRG-225ENST00000619541 MRPS27Q92552 414 aaKnown RBP16.82■□□□□ 0.28
SYNRG-225ENST00000619541 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 TOP1P11387 765 aaKnown RBP16.82■□□□□ 0.28
SYNRG-225ENST00000619541 REXO1L1PQ8IX06 675 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 CCDC12Q8WUD4 166 aaPredicted RBP16.82■□□□□ 0.28
SYNRG-225ENST00000619541 SECISBP2LQ93073 1101 aaKnown RBP16.82■□□□□ 0.28
SYNRG-225ENST00000619541 SLIT3O75094 1523 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 TEFQ10587 303 aa16.82■□□□□ 0.28
SYNRG-225ENST00000619541 NDUFA8P51970 172 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 HSP90B2PQ58FF3 399 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 ZNF589Q86UQ0 364 aaPredicted RBP16.81■□□□□ 0.28
SYNRG-225ENST00000619541 WDR24Q96S15 920 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 TTC41PQ6P2S7 1318 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 ZSCAN12O43309 604 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 GPR161Q8N6U8 529 aaKnown RBP16.81■□□□□ 0.28
SYNRG-225ENST00000619541 KDM4FA0A1W2PPD8 638 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 CCDC129Q6ZRS4 1044 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 CADPS2Q86UW7 1296 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 PARP3Q9Y6F1 533 aa16.81■□□□□ 0.28
SYNRG-225ENST00000619541 TRPM3Q9HCF6 1732 aaPredicted RBP16.81■□□□□ 0.28
SYNRG-225ENST00000619541 PXDNQ92626 1479 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
SYNRG-225ENST00000619541 AKAP4Q5JQC9 854 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 CHST3Q7LGC8 479 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 EXOC4Q96A65 974 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 DESI2Q9BSY9 194 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 NLRP2Q9NX02 1062 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 PHLPP2Q6ZVD8 1323 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 EIF4A1P60842 406 aaKnown RBP16.8■□□□□ 0.28
SYNRG-225ENST00000619541 LRRC37A3O60309 1634 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 JAKMIP3Q5VZ66 844 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 CTR9Q6PD62 1173 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 ERC1Q8IUD2 1116 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 KIAA1468Q9P260 1216 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 RCOR1Q9UKL0 485 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 PCDHA7Q9UN72 937 aa16.8■□□□□ 0.28
SYNRG-225ENST00000619541 PTPDC1A2A3K4 754 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 N4BP1O75113 896 aaKnown RBP16.79■□□□□ 0.28
SYNRG-225ENST00000619541 GOLGA1Q92805 767 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 FAN1Q9Y2M0 1017 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 BTBD11A6QL63 1104 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 RHOXF2BP0C7M4 288 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 SCRN1Q12765 414 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 DPF2Q92785 391 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 RHOXF2Q9BQY4 288 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 SUGCTQ9HAC7 445 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 POLA2Q14181 598 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 C1orf141Q5JVX7 400 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 TRIM65Q6PJ69 517 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 PACS2Q86VP3 889 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 RAB11FIP4Q86YS3 637 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 DHX58Q96C10 678 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 FUT8Q9BYC5 575 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 PPP2R2CQ9Y2T4 447 aa16.79■□□□□ 0.28
SYNRG-225ENST00000619541 MED1Q15648 1581 aaPredicted RBP16.79■□□□□ 0.28
SYNRG-225ENST00000619541 RNMTO43148 476 aaKnown RBP16.78■□□□□ 0.28
SYNRG-225ENST00000619541 IVLP07476 585 aa16.78■□□□□ 0.28
SYNRG-225ENST00000619541 LZTFL1Q9NQ48 299 aa16.78■□□□□ 0.28
SYNRG-225ENST00000619541 TLR7Q9NYK1 1049 aaKnown RBP16.78■□□□□ 0.28
SYNRG-225ENST00000619541 EIF3CLB5ME19 914 aaKnown RBP16.78■□□□□ 0.28
SYNRG-225ENST00000619541 HIP1O00291 1037 aa16.78■□□□□ 0.28
SYNRG-225ENST00000619541 FANCGO15287 622 aa16.78■□□□□ 0.28
SYNRG-225ENST00000619541 EIF3CQ99613 913 aaKnown RBP16.78■□□□□ 0.28
SYNRG-225ENST00000619541 RNF216Q9NWF9 866 aaPredicted RBP16.78■□□□□ 0.28
SYNRG-225ENST00000619541 CHGBP05060 677 aa16.78■□□□□ 0.28
SYNRG-225ENST00000619541 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
SYNRG-225ENST00000619541 DNAAF4Q8WXU2 420 aa16.78■□□□□ 0.28
SYNRG-225ENST00000619541 TMEM232C9JQI7 657 aa16.77■□□□□ 0.28
SYNRG-225ENST00000619541 ATP8B1O43520 1251 aa16.77■□□□□ 0.28
SYNRG-225ENST00000619541 IRX2Q9BZI1 471 aaPredicted RBP16.77■□□□□ 0.28
SYNRG-225ENST00000619541 TUBB4AP04350 444 aa16.77■□□□□ 0.28
SYNRG-225ENST00000619541 ADKP55263 362 aaKnown RBP16.77■□□□□ 0.28
SYNRG-225ENST00000619541 STK11IPQ8N1F8 1099 aa16.77■□□□□ 0.28
SYNRG-225ENST00000619541 BABAM1Q9NWV8 329 aa16.77■□□□□ 0.28
SYNRG-225ENST00000619541 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.27
SYNRG-225ENST00000619541 MICALL1Q8N3F8 863 aa16.77■□□□□ 0.27
SYNRG-225ENST00000619541 KLHDC4Q8TBB5 520 aa16.77■□□□□ 0.27
SYNRG-225ENST00000619541 RABEP2Q9H5N1 569 aa16.77■□□□□ 0.27
SYNRG-225ENST00000619541 CHPF2Q9P2E5 772 aa16.77■□□□□ 0.27
SYNRG-225ENST00000619541 MTX1Q13505 466 aa16.76■□□□□ 0.27
SYNRG-225ENST00000619541 ADCY9O60503 1353 aa16.76■□□□□ 0.27
SYNRG-225ENST00000619541 ZNF335Q9H4Z2 1342 aaPredicted RBP16.76■□□□□ 0.27
SYNRG-225ENST00000619541 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms