RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 CCDC91Q7Z6B0 441 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 ACSBG1Q96GR2 724 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 FOXR1Q6PIV2 292 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 LEKR1Q6ZMV7 388 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 CNTROBQ8N137 903 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 EPC1Q9H2F5 836 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 ECHDC1Q9NTX5 307 aa18.39■□□□□ 0.53
SEMA3B-214ENST00000619119 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.39■□□□□ 0.535e-7■□□□□ 11.1
SEMA3B-214ENST00000619119 ZNF165P49910 485 aa18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 CCDC85AQ96PX6 553 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 CWC25Q9NXE8 425 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 ACTN2P35609 894 aa18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 ORC3Q9UBD5 711 aaPredicted RBP18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 SUFUQ9UMX1 484 aa18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 AOX1Q06278 1338 aa18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 EIF3CLB5ME19 914 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 GLRX3O76003 335 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 EIF3CQ99613 913 aaKnown RBP18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 DONSONQ9NYP3 566 aa18.38■□□□□ 0.53
SEMA3B-214ENST00000619119 BOLA2Q9H3K6 86 aa18.37■□□□□ 0.53
SEMA3B-214ENST00000619119 VPS37CA5D8V6 355 aaPredicted RBP18.37■□□□□ 0.53
SEMA3B-214ENST00000619119 TDO2P48775 406 aa18.37■□□□□ 0.53
SEMA3B-214ENST00000619119 TDRD7Q8NHU6 1098 aaKnown RBP18.37■□□□□ 0.53
SEMA3B-214ENST00000619119 ADAM21Q9UKJ8 722 aa18.37■□□□□ 0.53
SEMA3B-214ENST00000619119 SMC3Q9UQE7 1217 aa18.37■□□□□ 0.53
SEMA3B-214ENST00000619119 TOGARAM1Q9Y4F4 1720 aa18.37■□□□□ 0.53
SEMA3B-214ENST00000619119 PTPN12Q05209 780 aaKnown RBP18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 GPATCH3Q96I76 525 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 L2HGDHQ9H9P8 463 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 PDRG1Q9NUG6 133 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 CCZ1BP86790 482 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 CCZ1P86791 482 aaPredicted RBP18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 MNS1Q8NEH6 495 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 TFCP2Q12800 502 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 DACT1Q9NYF0 836 aa18.36■□□□□ 0.53
SEMA3B-214ENST00000619119 TBC1D8O95759 1140 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 GPTP24298 496 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 DDB1Q16531 1140 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 TTC41PQ6P2S7 1318 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 LTBP4Q8N2S1 1624 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 TNS2Q63HR2 1409 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 STARD3NLO95772 234 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 CASP7P55210 303 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 NDUFB9Q9Y6M9 179 aa18.35■□□□□ 0.53
SEMA3B-214ENST00000619119 MCTP2Q6DN12 878 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 TTLL5Q6EMB2 1281 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 ARFGEF2Q9Y6D5 1785 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 GOLGA6L19H0YKK7 550 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 KIF2AO00139 706 aaPredicted RBP18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 NEMFO60524 1076 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 RFX5P48382 616 aaPredicted RBP18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 SATB1Q01826 763 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 TMED8Q6PL24 325 aaPredicted RBP18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 EXOC4Q96A65 974 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 ZNF594Q96JF6 807 aaPredicted RBP18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 AFDNP55196 1824 aaKnown RBP18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 COL14A1Q05707 1796 aaKnown RBP18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 UBXN6Q9BZV1 441 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 DISP2A7MBM2 1401 aa18.34■□□□□ 0.53
SEMA3B-214ENST00000619119 COL16A1Q07092 1604 aaPredicted RBP18.33■□□□□ 0.53
SEMA3B-214ENST00000619119 TOM1O60784 492 aa18.33■□□□□ 0.53
SEMA3B-214ENST00000619119 FAM173BQ6P4H8 233 aa18.33■□□□□ 0.53
SEMA3B-214ENST00000619119 EDC3Q96F86 508 aaKnown RBP18.33■□□□□ 0.53
SEMA3B-214ENST00000619119 ELP1O95163 1332 aa18.33■□□□□ 0.53
SEMA3B-214ENST00000619119 LAMB4A4D0S4 1761 aa18.33■□□□□ 0.53
SEMA3B-214ENST00000619119 AHDC1Q5TGY3 1603 aaPredicted RBP18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 H7C1W4 665 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 FOXO4P98177 505 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 TTC6Q86TZ1 520 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 EGFL6Q8IUX8 553 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 PPM1EQ8WY54 764 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 FAM89AQ96GI7 184 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 COPRSQ9NQ92 184 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 ZBTB1Q9Y2K1 713 aa18.33■□□□□ 0.52
SEMA3B-214ENST00000619119 IVLP07476 585 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 MAP2K2P36507 400 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 RABL6Q3YEC7 729 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 HOMER1Q86YM7 354 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 ANKRD20A12PQ8NF67 263 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 GNL2Q13823 731 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 SYNE4Q8N205 404 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 UBR2Q8IWV8 1755 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 SPATA31A1Q5TZJ5 1347 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 GOLGA6L4A6NEF3 574 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 HLFQ16534 295 aa18.32■□□□□ 0.52
SEMA3B-214ENST00000619119 CCDC93Q567U6 631 aa18.31■□□□□ 0.52
SEMA3B-214ENST00000619119 H3BQF6 201 aa18.31■□□□□ 0.52
SEMA3B-214ENST00000619119 SGSM2O43147 1006 aa18.31■□□□□ 0.52
SEMA3B-214ENST00000619119 ATP6V1AP38606 617 aa18.31■□□□□ 0.52
SEMA3B-214ENST00000619119 CARD6Q9BX69 1037 aa18.31■□□□□ 0.52
SEMA3B-214ENST00000619119 TBC1D2BQ9UPU7 963 aa18.31■□□□□ 0.52
SEMA3B-214ENST00000619119 BCL9O00512 1426 aa18.31■□□□□ 0.52
SEMA3B-214ENST00000619119 USP42Q9H9J4 1324 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms