RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 TDO2P48775 406 aa14.33□□□□□ -0.12
SRRT-216ENST00000618262 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.12
SRRT-216ENST00000618262 NLGN2Q8NFZ4 835 aa14.33□□□□□ -0.12
SRRT-216ENST00000618262 CSF1RP07333 972 aa14.32□□□□□ -0.12
SRRT-216ENST00000618262 POLA2Q14181 598 aa14.32□□□□□ -0.12
SRRT-216ENST00000618262 ZSCAN30Q86W11 494 aa14.32□□□□□ -0.12
SRRT-216ENST00000618262 ZNF831Q5JPB2 1677 aa14.32□□□□□ -0.12
SRRT-216ENST00000618262 NOL8Q76FK4 1167 aaKnown RBP14.32□□□□□ -0.12
SRRT-216ENST00000618262 AACSQ86V21 672 aa14.32□□□□□ -0.12
SRRT-216ENST00000618262 RHPN1Q8TCX5 695 aa14.32□□□□□ -0.12
SRRT-216ENST00000618262 NSFL1CQ9UNZ2 370 aaKnown RBP14.32□□□□□ -0.12
SRRT-216ENST00000618262 CICQ96RK0 1608 aaPredicted RBP14.31□□□□□ -0.12
SRRT-216ENST00000618262 CDHR2Q9BYE9 1310 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 TNNT1P13805 278 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 MSNP26038 577 aaKnown RBP14.31□□□□□ -0.12
SRRT-216ENST00000618262 IGHMBP2P38935 993 aaKnown RBP14.31□□□□□ -0.12
SRRT-216ENST00000618262 ANKRD18AQ8IVF6 992 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 SCN7AQ01118 1682 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 DPEP1P16444 411 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 ANKIB1Q9P2G1 1089 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 KLRK1P26718 216 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 RPS8P62241 208 aaKnown RBP14.31□□□□□ -0.12
SRRT-216ENST00000618262 ATG9AQ7Z3C6 839 aa14.31□□□□□ -0.12
SRRT-216ENST00000618262 NME8Q8N427 588 aa14.3□□□□□ -0.12
SRRT-216ENST00000618262 EAF2Q96CJ1 260 aaPredicted RBP14.3□□□□□ -0.12
SRRT-216ENST00000618262 H0YIN7 160 aa14.3□□□□□ -0.12
SRRT-216ENST00000618262 ADORA1P30542 326 aa14.3□□□□□ -0.12
SRRT-216ENST00000618262 PTGER2P43116 358 aa14.3□□□□□ -0.12
SRRT-216ENST00000618262 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
SRRT-216ENST00000618262 BCORQ6W2J9 1755 aa14.3□□□□□ -0.12
SRRT-216ENST00000618262 EYA2O00167 538 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 C21orf2O43822 256 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 SRGNP10124 158 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 BRIP1Q9BX63 1249 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 RIMBP2O15034 1052 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 CHRNDQ07001 517 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 FOXD4Q12950 439 aaPredicted RBP14.29□□□□□ -0.12
SRRT-216ENST00000618262 APBB1IPQ7Z5R6 666 aaPredicted RBP14.29□□□□□ -0.12
SRRT-216ENST00000618262 SMC5Q8IY18 1101 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 PROCA1Q8NCQ7 364 aaPredicted RBP14.29□□□□□ -0.12
SRRT-216ENST00000618262 PAIP2Q9BPZ3 127 aaKnown RBP14.29□□□□□ -0.12
SRRT-216ENST00000618262 SNRKQ9NRH2 765 aa14.29□□□□□ -0.12
SRRT-216ENST00000618262 MTX1Q13505 466 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 EDC3Q96F86 508 aaKnown RBP14.28□□□□□ -0.12
SRRT-216ENST00000618262 GRPEL1Q9HAV7 217 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 TNRC6CQ9HCJ0 1690 aaKnown RBP14.28□□□□□ -0.12
SRRT-216ENST00000618262 SOCS7O14512 581 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 SLC10A5Q5PT55 438 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 DBNDD2Q9BQY9 259 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 PLA2G12BQ9BX93 195 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 FHDC1Q9C0D6 1143 aaPredicted RBP14.28□□□□□ -0.12
SRRT-216ENST00000618262 SPON1Q9HCB6 807 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 CEP126Q9P2H0 1117 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 ANKRD36CQ5JPF3 1778 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 NUCB1Q02818 461 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 ZC3H12AQ5D1E8 599 aaKnown RBP14.28□□□□□ -0.12
SRRT-216ENST00000618262 PI16Q6UXB8 463 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 MSL3Q8N5Y2 521 aaKnown RBP14.28□□□□□ -0.12
SRRT-216ENST00000618262 COPRSQ9NQ92 184 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 BCS1LQ9Y276 419 aa14.28□□□□□ -0.12
SRRT-216ENST00000618262 IFIT2P09913 472 aaKnown RBP14.27□□□□□ -0.12
SRRT-216ENST00000618262 SF3B3Q15393 1217 aaKnown RBP14.27□□□□□ -0.12
SRRT-216ENST00000618262 GET4Q7L5D6 327 aaPredicted RBP14.27□□□□□ -0.12
SRRT-216ENST00000618262 GCC1Q96CN9 775 aa14.27□□□□□ -0.12
SRRT-216ENST00000618262 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.12
SRRT-216ENST00000618262 MINPP1Q9UNW1 487 aa14.27□□□□□ -0.12
SRRT-216ENST00000618262 PDE6BP35913 854 aa14.27□□□□□ -0.13
SRRT-216ENST00000618262 SETDB1Q15047 1291 aa14.27□□□□□ -0.13
SRRT-216ENST00000618262 GORABQ5T7V8 394 aa14.27□□□□□ -0.13
SRRT-216ENST00000618262 TXNRD3Q86VQ6 643 aa14.27□□□□□ -0.13
SRRT-216ENST00000618262 CLASRPQ8N2M8 674 aaKnown RBP14.27□□□□□ -0.13
SRRT-216ENST00000618262 DONSONQ9NYP3 566 aa14.27□□□□□ -0.13
SRRT-216ENST00000618262 IBTKQ9P2D0 1353 aaPredicted RBP14.27□□□□□ -0.13
SRRT-216ENST00000618262 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 HMGB2P26583 209 aaKnown RBP14.26□□□□□ -0.13
SRRT-216ENST00000618262 GYG1P46976 350 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 CCT2P78371 535 aaKnown RBP14.26□□□□□ -0.13
SRRT-216ENST00000618262 BIRC2Q13490 618 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 DNAJC21Q5F1R6 531 aaKnown RBP14.26□□□□□ -0.13
SRRT-216ENST00000618262 PRPF40BQ6NWY9 871 aaKnown RBP14.26□□□□□ -0.13
SRRT-216ENST00000618262 SLC16A10Q8TF71 515 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 RBM17Q96I25 401 aaKnown RBP14.26□□□□□ -0.13
SRRT-216ENST00000618262 A0A1B0GUL7 405 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 CHGBP05060 677 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 ATP2B3Q16720 1220 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
SRRT-216ENST00000618262 KIF1BPQ96EK5 621 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 CALCOCO1Q9P1Z2 691 aa14.26□□□□□ -0.13
SRRT-216ENST00000618262 SDR16C5Q8N3Y7 309 aa14.25□□□□□ -0.13
SRRT-216ENST00000618262 GRAPQ13588 217 aa14.25□□□□□ -0.13
SRRT-216ENST00000618262 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
SRRT-216ENST00000618262 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
SRRT-216ENST00000618262 TNNI3KQ59H18 835 aa14.25□□□□□ -0.13
SRRT-216ENST00000618262 SASS6Q6UVJ0 657 aa14.25□□□□□ -0.13
SRRT-216ENST00000618262 CREBRFQ8IUR6 639 aa14.25□□□□□ -0.13
SRRT-216ENST00000618262 DBNLQ9UJU6 430 aaKnown RBP14.25□□□□□ -0.13
SRRT-216ENST00000618262 FPGT-TNNI3KV9GXZ4 949 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms