RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CDK12Q9NYV4 1490 aaPredicted RBP7.68□□□□□ -1.18
LMO3-235ENST00000616247 ERLIN1O75477 346 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 RXRAP19793 462 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 NLRP12P59046 1061 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 MYL5Q02045 173 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 ZNF827Q17R98 1081 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 PROSER3Q2NL68 480 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 CCDC93Q567U6 631 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 ZNF569Q5MCW4 686 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 AXDND1Q5T1B0 1012 aaPredicted RBP7.67□□□□□ -1.18
LMO3-235ENST00000616247 DHX32Q7L7V1 743 aaKnown RBP7.67□□□□□ -1.18
LMO3-235ENST00000616247 FMR1NBQ8N0W7 255 aaPredicted RBP7.67□□□□□ -1.18
LMO3-235ENST00000616247 IL17RAQ96F46 866 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 FAM53CQ9NYF3 392 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 HDAC5Q9UQL6 1122 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 ATP7BP35670 1465 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 NEO1Q92859 1461 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 TFRCP02786 760 aaKnown RBP7.67□□□□□ -1.18
LMO3-235ENST00000616247 LONRF3Q496Y0 759 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 ADALQ6DHV7 355 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 TOGARAM2Q6ZUX3 1019 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 CNNM3Q8NE01 707 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 SLC26A8Q96RN1 970 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 MPHOSPH8Q99549 860 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 JRKLQ9Y4A0 524 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 PHLPP2Q6ZVD8 1323 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 AATKQ6ZMQ8 1374 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 FRMPD1Q5SYB0 1578 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 INO80Q9ULG1 1556 aaPredicted RBP7.67□□□□□ -1.18
LMO3-235ENST00000616247 MAP2P11137 1827 aaKnown RBP7.67□□□□□ -1.18
LMO3-235ENST00000616247 A0A0G2JLW4 131 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 GOLGA8BA8MQT2 603 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 KIF5CO60282 957 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 PFKFB1P16118 471 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 SLC20A2Q08357 652 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 NEXNQ0ZGT2 675 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 MTF1Q14872 753 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 HSP90AB3PQ58FF7 597 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 ICE2Q659A1 982 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 NAA16Q6N069 864 aaPredicted RBP7.67□□□□□ -1.18
LMO3-235ENST00000616247 ENGASEQ8NFI3 743 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 EFCC1Q9HA90 598 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 RAI14Q9P0K7 980 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 PRR36Q9H6K5 1346 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 PTPRMP28827 1452 aa7.67□□□□□ -1.18
LMO3-235ENST00000616247 DEPDC5O75140 1603 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 PRAMEF22A3QJZ6 481 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 GRM8O00222 908 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 ARHGAP6O43182 974 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 IVLP07476 585 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
LMO3-235ENST00000616247 STX17P56962 302 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 MCMDC2Q4G0Z9 681 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 ZNF530Q6P9A1 599 aaPredicted RBP7.66□□□□□ -1.18
LMO3-235ENST00000616247 TRIM65Q6PJ69 517 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 PPFIBP1Q86W92 1011 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 CCDC82Q8N4S0 544 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 KCNG4Q8TDN1 519 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 EXOC4Q96A65 974 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 DBNDD2Q9BQY9 259 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 FUT8Q9BYC5 575 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 SNRKQ9NRH2 765 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 ZC3H13Q5T200 1668 aaKnown RBP7.66□□□□□ -1.18
LMO3-235ENST00000616247 KLF18A0A0U1RQI7 1052 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 EIF3CLB5ME19 914 aaKnown RBP7.66□□□□□ -1.18
LMO3-235ENST00000616247 MNAT1P51948 309 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 FKBP4Q02790 459 aaKnown RBP eCLIP7.66□□□□□ -1.18
LMO3-235ENST00000616247 PPARDQ03181 441 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 TFCP2Q12800 502 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 HDXQ7Z353 690 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 REXO1L1PQ8IX06 675 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 DHX37Q8IY37 1157 aaKnown RBP7.66□□□□□ -1.18
LMO3-235ENST00000616247 ABTB2Q8N961 1025 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 CLIC6Q96NY7 704 aa7.66□□□□□ -1.18
LMO3-235ENST00000616247 EIF3CQ99613 913 aaKnown RBP7.66□□□□□ -1.18
LMO3-235ENST00000616247 DBF4Q9UBU7 674 aaPredicted RBP7.66□□□□□ -1.18
LMO3-235ENST00000616247 VWA3AA6NCI4 1184 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 TXLNAP40222 546 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 DNAJC21Q5F1R6 531 aaKnown RBP7.65□□□□□ -1.18
LMO3-235ENST00000616247 MUM1L1Q5H9M0 696 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 STOX1Q6ZVD7 989 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 RALYLQ86SE5 291 aaKnown RBP7.65□□□□□ -1.18
LMO3-235ENST00000616247 NFATC2IPQ8NCF5 419 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 LINC00301Q8NCQ3 95 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 RGS22Q8NE09 1264 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 RABGGTAQ92696 567 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 ABCB6Q9NP58 842 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 RICTORQ6R327 1708 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 PFKFB2O60825 505 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
LMO3-235ENST00000616247 CTDNEP1O95476 244 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 DDX58O95786 925 aaKnown RBP7.65□□□□□ -1.18
LMO3-235ENST00000616247 TUBB4AP04350 444 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 FKBP15Q5T1M5 1219 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 MYD88Q99836 296 aa7.65□□□□□ -1.18
LMO3-235ENST00000616247 ATP5J2-PTCD1G3V325 749 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 H0YHG0 523 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.19
LMO3-235ENST00000616247 LIG3P49916 1009 aa7.65□□□□□ -1.19
LMO3-235ENST00000616247 DHX8Q14562 1220 aaKnown RBP7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms