RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 MBD4O95243 580 aa4.09□□□□□ -1.76
LIG4-205ENST00000614526 ADD2P35612 726 aa4.09□□□□□ -1.76
LIG4-205ENST00000614526 RRP12Q5JTH9 1297 aaKnown RBP4.09□□□□□ -1.76
LIG4-205ENST00000614526 APPBP2Q92624 585 aa4.09□□□□□ -1.76
LIG4-205ENST00000614526 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.09□□□□□ -1.76
LIG4-205ENST00000614526 ZNF219Q9P2Y4 722 aaPredicted RBP4.09□□□□□ -1.76
LIG4-205ENST00000614526 TAF1P21675 1872 aa4.09□□□□□ -1.76
LIG4-205ENST00000614526 COL4A1P02462 1669 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 GYS1P13807 737 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 RXRAP19793 462 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 SYT1P21579 422 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 OLFM4Q6UX06 510 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 NYXQ9GZU5 481 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 RBM27Q9P2N5 1060 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 NSFL1CQ9UNZ2 370 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 NWD2Q9ULI1 1742 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 TUBGCP6Q96RT7 1819 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 DDX11L8A8MPP1 907 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 GOLGA6L22H0YM25 854 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 ZNF213O14771 459 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 SERPINB2P05120 415 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 UQCRFS1P1P0C7P4 283 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 GUCY1B3Q02153 619 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 CTDSPL2Q05D32 466 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 MAP3K12Q12852 859 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 SF3B3Q15393 1217 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 CAVIN4Q5BKX8 364 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 PRR5LQ6MZQ0 368 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 CCDC144CPQ8IYA2 1237 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 SDR42E1Q8WUS8 393 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 FAM84BQ96KN1 310 aaPredicted RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 TM6SF1Q9BZW5 370 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 BSDC1Q9NW68 430 aaPredicted RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 MINDY4BA8MYZ0 360 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 EPB41L2O43491 1005 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 CYP7A1P22680 504 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 ARID4AP29374 1257 aaPredicted RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 DYNLL1P63167 89 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 IMMTQ16891 758 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 ZNF827Q17R98 1081 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 LARP1BQ659C4 914 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 CAVIN1Q6NZI2 390 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 ADGRA1Q86SQ6 560 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 LCORLQ8N3X6 602 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 RPGRQ92834 1020 aaKnown RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 KCNB2Q92953 911 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 ZKSCAN3Q9BRR0 538 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 DSCC1Q9BVC3 393 aa4.08□□□□□ -1.76
LIG4-205ENST00000614526 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.08□□□□□ -1.76
LIG4-205ENST00000614526 ATRNO75882 1429 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 CYP2D7A0A087X1C5 515 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 B4E1Z4 1266 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 FIBPO43427 364 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 STX6O43752 255 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 BRD1O95696 1058 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 ZFYP08048 801 aaPredicted RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 RXRBP28702 533 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 TM4SF1P30408 202 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 RBM6P78332 1123 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 KRT32Q14532 448 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 TTF1Q15361 905 aaPredicted RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 LRRFIP1Q32MZ4 808 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 DHX32Q7L7V1 743 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.07□□□□□ -1.76
LIG4-205ENST00000614526 INTS4Q96HW7 963 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 SLC4A4Q9Y6R1 1079 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 WNK3Q9BYP7 1800 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 GADD45BO75293 160 aaPredicted RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 TDO2P48775 406 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 CEBPZQ03701 1054 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 EVX2Q03828 476 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 DDR1Q08345 913 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 SLC10A5Q5PT55 438 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 ZSCAN25Q6NSZ9 544 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 RALYLQ86SE5 291 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 CCDC82Q8N4S0 544 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 FBXW7Q969H0 707 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 STRBPQ96SI9 672 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 NAPBQ9H115 298 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 TFIP11Q9UBB9 837 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 CNPY2Q9Y2B0 182 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 RPAP1Q9BWH6 1393 aaPredicted RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 BTAF1O14981 1849 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 TCRBV5S4A2TA0A5A2 114 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 RIMBP2O15034 1052 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 PRC1O43663 620 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 PRDM1O75626 825 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 PRDX5P30044 214 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 HIBADHP31937 336 aaKnown RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 SCRN1Q12765 414 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 OTUD7BQ6GQQ9 843 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 CDC37L1Q7L3B6 337 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 COL23A1Q86Y22 540 aaPredicted RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 TBC1D10CQ8IV04 446 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 ZSCAN31Q96LW9 406 aaPredicted RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 MYL10Q9BUA6 226 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 SENP2Q9HC62 589 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 EPB41L4AQ9HCS5 686 aaPredicted RBP4.07□□□□□ -1.76
LIG4-205ENST00000614526 GJB4Q9NTQ9 266 aa4.07□□□□□ -1.76
LIG4-205ENST00000614526 LMBRD1Q9NUN5 540 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms