RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RIOK3O14730 519 aaKnown RBP10.03□□□□□ -0.8
LIG4-204ENST00000611712 LRMPQ12912 555 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 UBXN4Q92575 508 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 IFNKQ9P0W0 207 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 RICTORQ6R327 1708 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 B4E1Z4 1266 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 URI1O94763 535 aaPredicted RBP10.03□□□□□ -0.8
LIG4-204ENST00000611712 TXLNAP40222 546 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 UBASH3AP57075 661 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 TOB2Q14106 344 aaPredicted RBP10.03□□□□□ -0.8
LIG4-204ENST00000611712 WTAPQ15007 396 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 CEMIPQ8WUJ3 1361 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 TCIRG1Q13488 830 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 CCDC150Q8NCX0 1101 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 PYCARDQ9ULZ3 195 aa10.03□□□□□ -0.8
LIG4-204ENST00000611712 RPAP1Q9BWH6 1393 aaPredicted RBP10.02□□□□□ -0.8
LIG4-204ENST00000611712 ITSN1Q15811 1721 aa10.02□□□□□ -0.8
LIG4-204ENST00000611712 USP42Q9H9J4 1324 aaKnown RBP10.02□□□□□ -0.8
LIG4-204ENST00000611712 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.8
LIG4-204ENST00000611712 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.8
LIG4-204ENST00000611712 CYP27B1O15528 508 aa10.02□□□□□ -0.8
LIG4-204ENST00000611712 SLFNL1Q499Z3 407 aa10.02□□□□□ -0.8
LIG4-204ENST00000611712 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.8
LIG4-204ENST00000611712 ZNF274Q96GC6 653 aaPredicted RBP10.02□□□□□ -0.8
LIG4-204ENST00000611712 SLC4A4Q9Y6R1 1079 aa10.02□□□□□ -0.8
LIG4-204ENST00000611712 NCAPD2Q15021 1401 aa10.02□□□□□ -0.8
LIG4-204ENST00000611712 CAVIN4Q5BKX8 364 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 ZMYM1Q5SVZ6 1142 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 TEX35Q5T0J7 233 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 ANO1Q5XXA6 986 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 IQCA1Q86XH1 822 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
LIG4-204ENST00000611712 FTOQ9C0B1 505 aaKnown RBP eCLIP10.02□□□□□ -0.81
LIG4-204ENST00000611712 ADGRL3Q9HAR2 1447 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 ERVV-2B6SEH9 535 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 PDIA3P30101 505 aaKnown RBP10.02□□□□□ -0.81
LIG4-204ENST00000611712 GPS2Q13227 327 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 RTN1Q16799 776 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 MAGEB6Q8N7X4 407 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 NSUN7Q8NE18 718 aaKnown RBP10.02□□□□□ -0.81
LIG4-204ENST00000611712 SMARCE1Q969G3 411 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 KRT23Q9C075 422 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 CGNQ9P2M7 1197 aaKnown RBP10.02□□□□□ -0.81
LIG4-204ENST00000611712 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.02□□□□□ -0.81
LIG4-204ENST00000611712 ANGEL1Q9UNK9 670 aaKnown RBP10.02□□□□□ -0.81
LIG4-204ENST00000611712 V9GYY5 206 aaPredicted RBP10.02□□□□□ -0.81
LIG4-204ENST00000611712 PXDNLA1KZ92 1463 aa10.02□□□□□ -0.81
LIG4-204ENST00000611712 FGAP02671 866 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 AK9Q5TCS8 1911 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 NPHP4O75161 1426 aaPredicted RBP10.01□□□□□ -0.81
LIG4-204ENST00000611712 G3V3G9 751 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 ZSCAN12O43309 604 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 RAD21O60216 631 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 DCAF8Q5TAQ9 597 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 CNNM2Q9H8M5 875 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 DIP2AQ14689 1571 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 ADAMTS2O95450 1211 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 ADORA1P30542 326 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 GOLGA6L1Q8N7Z2 621 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 MAST3O60307 1309 aa10.01□□□□□ -0.81
LIG4-204ENST00000611712 MBD4O95243 580 aa10□□□□□ -0.81
LIG4-204ENST00000611712 CYP7A1P22680 504 aa10□□□□□ -0.81
LIG4-204ENST00000611712 MIGA1Q8NAN2 632 aa10□□□□□ -0.81
LIG4-204ENST00000611712 PHKBQ93100 1093 aa10□□□□□ -0.81
LIG4-204ENST00000611712 ZKSCAN3Q9BRR0 538 aa10□□□□□ -0.81
LIG4-204ENST00000611712 NRBP1Q9UHY1 535 aa10□□□□□ -0.81
LIG4-204ENST00000611712 ZNF652Q9Y2D9 606 aa10□□□□□ -0.81
LIG4-204ENST00000611712 DIP2BQ9P265 1576 aa10□□□□□ -0.81
LIG4-204ENST00000611712 ZNF202O95125 648 aa10□□□□□ -0.81
LIG4-204ENST00000611712 CATIPQ7Z7H3 387 aa10□□□□□ -0.81
LIG4-204ENST00000611712 CTCFLQ8NI51 663 aaPredicted RBP10□□□□□ -0.81
LIG4-204ENST00000611712 CPLX3Q8WVH0 158 aa10□□□□□ -0.81
LIG4-204ENST00000611712 MYL10Q9BUA6 226 aa10□□□□□ -0.81
LIG4-204ENST00000611712 CCDC94Q9BW85 323 aaPredicted RBP10□□□□□ -0.81
LIG4-204ENST00000611712 TMEM94Q12767 1356 aa10□□□□□ -0.81
LIG4-204ENST00000611712 RESTQ13127 1097 aa10□□□□□ -0.81
LIG4-204ENST00000611712 CCDC152Q4G0S7 254 aa10□□□□□ -0.81
LIG4-204ENST00000611712 TMX1Q9H3N1 280 aa10□□□□□ -0.81
LIG4-204ENST00000611712 GPR108Q9NPR9 543 aa10□□□□□ -0.81
LIG4-204ENST00000611712 A0A087WWV3 80 aa10□□□□□ -0.81
LIG4-204ENST00000611712 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
LIG4-204ENST00000611712 ADALQ6DHV7 355 aa10□□□□□ -0.81
LIG4-204ENST00000611712 PCDHA7Q9UN72 937 aa10□□□□□ -0.81
LIG4-204ENST00000611712 ANKRD26Q9UPS8 1709 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 A0A0U1RQG5 324 aaPredicted RBP9.99□□□□□ -0.81
LIG4-204ENST00000611712 CHGBP05060 677 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 KIAA1524Q8TCG1 905 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 CDC5LQ99459 802 aaKnown RBP9.99□□□□□ -0.81
LIG4-204ENST00000611712 TAF6LQ9Y6J9 622 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 H7C1W4 665 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 ADD1P35611 737 aaKnown RBP9.99□□□□□ -0.81
LIG4-204ENST00000611712 TMTC2Q8N394 836 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 OSBP2Q969R2 916 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 TMX4Q9H1E5 349 aaPredicted RBP9.99□□□□□ -0.81
LIG4-204ENST00000611712 DNAI1Q9UI46 699 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 SH3TC1Q8TE82 1336 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 ZNF532Q9HCE3 1301 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 YEATS4O95619 227 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 KRT40Q6A162 431 aa9.99□□□□□ -0.81
LIG4-204ENST00000611712 MAGEC2Q9UBF1 373 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms