RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PI4K2BQ8TCG2 481 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 GPATCH3Q96I76 525 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 COA1Q9GZY4 146 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 VPS33BQ9H267 617 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 CD209Q9NNX6 404 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 KCNQ5Q9NR82 932 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 SNRKQ9NRH2 765 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 ECHDC1Q9NTX5 307 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 RNF181Q9P0P0 153 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 JAG2Q9Y219 1238 aa9.4□□□□□ -0.9
MSH6-211ENST00000606499 TTC41PQ6P2S7 1318 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 FRAT2O75474 233 aaPredicted RBP9.39□□□□□ -0.91
MSH6-211ENST00000606499 UQCRFS1P1P0C7P4 283 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 ATP5JP18859 108 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 RGS3P49796 1198 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 CHAF1AQ13111 956 aaPredicted RBP9.39□□□□□ -0.91
MSH6-211ENST00000606499 C9orf131Q5VYM1 1079 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 TDRD7Q8NHU6 1098 aaKnown RBP9.39□□□□□ -0.91
MSH6-211ENST00000606499 JDP2Q8WYK2 163 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 GNL3LQ9NVN8 582 aaKnown RBP9.39□□□□□ -0.91
MSH6-211ENST00000606499 HMG20BQ9P0W2 317 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 STAP2Q9UGK3 403 aa9.39□□□□□ -0.91
MSH6-211ENST00000606499 AOX1Q06278 1338 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 ZNF541Q9H0D2 1346 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 RAD17O75943 681 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 MAP4K4O95819 1239 aaPredicted RBP9.38□□□□□ -0.91
MSH6-211ENST00000606499 ZAP70P43403 619 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 GTF2IP78347 998 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 PODNQ7Z5L7 613 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 SPATA5Q8NB90 893 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 EDC3Q96F86 508 aaKnown RBP9.38□□□□□ -0.91
MSH6-211ENST00000606499 ZNF512BQ96KM6 892 aaPredicted RBP9.38□□□□□ -0.91
MSH6-211ENST00000606499 DNAJC2Q99543 621 aaKnown RBP9.38□□□□□ -0.91
MSH6-211ENST00000606499 MXD3Q9BW11 206 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 BOLA2Q9H3K6 86 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 ZNRF3Q9ULT6 936 aa9.38□□□□□ -0.91
MSH6-211ENST00000606499 PDS5AQ29RF7 1337 aaKnown RBP9.37□□□□□ -0.91
MSH6-211ENST00000606499 DCAF8L1A6NGE4 600 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 SEMA3EO15041 775 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 GLRX3O76003 335 aaKnown RBP9.37□□□□□ -0.91
MSH6-211ENST00000606499 CYP2E1P05181 493 aaPredicted RBP9.37□□□□□ -0.91
MSH6-211ENST00000606499 CXCL9Q07325 125 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 DACT2Q5SW24 774 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 POTEDQ86YR6 584 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 HAUS7Q99871 368 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 ANTXR1Q9H6X2 564 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 DENND2AQ9ULE3 1009 aa9.37□□□□□ -0.91
MSH6-211ENST00000606499 FAM205AQ6ZU69 1335 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 FZD9O00144 591 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 GOLIM4O00461 696 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 PSMD14O00487 310 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 ERC2O15083 957 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 GSPT1P15170 499 aaKnown RBP9.36□□□□□ -0.91
MSH6-211ENST00000606499 GRIK5Q16478 980 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 TTC22Q5TAA0 569 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 TTLL5Q6EMB2 1281 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 CERS5Q8N5B7 392 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.36□□□□□ -0.91
MSH6-211ENST00000606499 PIH1D3Q9NQM4 214 aaKnown RBP9.36□□□□□ -0.91
MSH6-211ENST00000606499 PAG1Q9NWQ8 432 aa9.36□□□□□ -0.91
MSH6-211ENST00000606499 MYH2Q9UKX2 1941 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 ZBTB22O15209 634 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 PRDX5P30044 214 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 EIF6P56537 245 aaKnown RBP9.35□□□□□ -0.91
MSH6-211ENST00000606499 MFSD14BQ5SR56 506 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 CIAPIN1Q6FI81 312 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 ABCF2Q9UG63 623 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 ZBTB12Q9Y330 459 aaPredicted RBP9.35□□□□□ -0.91
MSH6-211ENST00000606499 GJA3Q9Y6H8 435 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 ECM29Q5VYK3 1845 aa9.35□□□□□ -0.91
MSH6-211ENST00000606499 SALL1Q9NSC2 1324 aa9.34□□□□□ -0.91
MSH6-211ENST00000606499 WDR90Q96KV7 1748 aa9.34□□□□□ -0.91
MSH6-211ENST00000606499 VIL1P09327 827 aaKnown RBP9.34□□□□□ -0.91
MSH6-211ENST00000606499 TNIP1Q15025 636 aa9.34□□□□□ -0.91
MSH6-211ENST00000606499 RSBN1LQ6PCB5 846 aaPredicted RBP9.34□□□□□ -0.91
MSH6-211ENST00000606499 WDR66Q8TBY9 1149 aa9.34□□□□□ -0.91
MSH6-211ENST00000606499 ZC3H4Q9UPT8 1303 aaKnown RBP9.33□□□□□ -0.92
MSH6-211ENST00000606499 TRIM6-TRIM34B2RNG4 842 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 F8W031 263 aaPredicted RBP9.33□□□□□ -0.92
MSH6-211ENST00000606499 IDH1O75874 414 aaKnown RBP9.33□□□□□ -0.92
MSH6-211ENST00000606499 DDNO94850 711 aaPredicted RBP9.33□□□□□ -0.92
MSH6-211ENST00000606499 CHGBP05060 677 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 LDHBP07195 334 aaKnown RBP9.33□□□□□ -0.92
MSH6-211ENST00000606499 SDSP20132 328 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 GMPSP49915 693 aaPredicted RBP9.33□□□□□ -0.92
MSH6-211ENST00000606499 KIAA0825Q8IV33 1275 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 GPC2Q8N158 579 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 ZNF384Q8TF68 577 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 TBC1D22AQ8WUA7 517 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 RILPL2Q969X0 211 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 GMLQ99445 158 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 LRP2BPQ9P2M1 347 aa9.33□□□□□ -0.92
MSH6-211ENST00000606499 CDK5RAP2Q96SN8 1893 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms